Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_2869 | | ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) | 1.0 | Sama_2726 | | 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) | 0.90 | 8 |
Shewanella loihica PV-4 | 0.65 | Shew_0719 | | periplasmic binding protein (RefSeq) | 0.39 | Shew_3069 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | low | > 60 |
Shewanella sp. ANA-3 | 0.63 | Shewana3_3272 | | periplasmic binding protein (RefSeq) | 0.46 | Shewana3_3506 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.61 | SO3709 | | ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) | 0.46 | SO0774 | | 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) | 0.79 | 7 |
Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_12055 | | cobalamin-binding protein | 0.44 | CSW01_12545 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 62 |
Dechlorosoma suillum PS | 0.34 | Dsui_0539 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.11 | Dsui_0682 | | 5,10-methenyltetrahydrofolate synthetase | — | — |
Marinobacter adhaerens HP15 | 0.31 | HP15_3954 | | substrate-binding periplasmic (PBP) ABC transporter protein | 0.31 | HP15_3211 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 73 |
Serratia liquefaciens MT49 | 0.30 | IAI46_03570 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.35 | IAI46_20895 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF63 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.34 | GFF3012 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | low | > 78 |
Dickeya dianthicola ME23 | 0.28 | DZA65_RS17100 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | DZA65_RS02475 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 75 |
Rahnella sp. WP5 | 0.27 | EX31_RS03185 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | EX31_RS21480 | | 5-formyltetrahydrofolate cyclo-ligase | 0.61 | 58 |
Pseudomonas stutzeri RCH2 | 0.27 | Psest_3542 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.29 | Psest_0170 | | 5,10-methenyltetrahydrofolate synthetase | low | > 67 |
Escherichia coli ECRC62 | 0.27 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | BNILDI_09930 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Escherichia fergusonii Becca | 0.27 | EFB2_03886 | | Vitamin B12-binding protein | 0.39 | EFB2_00991 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 86 |
Enterobacter asburiae PDN3 | 0.27 | EX28DRAFT_3747 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.37 | EX28DRAFT_2964 | | 5,10-methenyltetrahydrofolate synthetase | low | > 76 |
Escherichia coli ECOR27 | 0.27 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | NOLOHH_11395 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | low | > 57 |
Escherichia coli ECRC101 | 0.27 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | OKFHMN_19485 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Escherichia coli ECRC102 | 0.27 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | NIAGMN_17250 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Escherichia coli ECRC98 | 0.27 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | JDDGAC_23125 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Escherichia coli ECOR38 | 0.27 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | HEPCGN_18775 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | low | > 85 |
Escherichia coli Nissle 1917 | 0.27 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | ECOLIN_RS16205 | | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Escherichia coli ECRC99 | 0.27 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | KEDOAH_08655 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Enterobacter sp. TBS_079 | 0.27 | MPMX20_00844 | | Vitamin B12-binding protein | 0.38 | MPMX20_03770 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 85 |
Escherichia coli ECRC101 | 0.27 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | MCAODC_10005 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | — | — |
Dickeya dianthicola 67-19 | 0.27 | HGI48_RS16015 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.39 | HGI48_RS02370 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.27 | HER17_RS05645 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.40 | HER17_RS19095 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 75 |
Pseudomonas simiae WCS417 | 0.27 | PS417_25220 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.23 | PS417_27305 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 88 |
Dickeya dadantii 3937 | 0.25 | DDA3937_RS15875 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.40 | DDA3937_RS02410 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 74 |
Pantoea sp. MT58 | 0.25 | IAI47_15575 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.36 | IAI47_03730 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 76 |
Pseudomonas fluorescens FW300-N2E3 | 0.25 | AO353_06665 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.22 | AO353_08780 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 101 |
Pseudomonas sp. S08-1 | 0.25 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.21 | OH686_11225 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 80 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_01385 | | iron ABC transporter substrate-binding protein | 0.15 | CA264_15880 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.13 | OKGIIK_11145 | fepB | cobalamin-binding protein | 0.22 | OKGIIK_12225 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.13 | LRK54_RS04270 | | cobalamin-binding protein | 0.23 | LRK54_RS11670 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 59 |
Dyella japonica UNC79MFTsu3.2 | 0.13 | ABZR86_RS10435 | | cobalamin-binding protein | 0.20 | ABZR86_RS11995 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 74 |
Azospirillum brasilense Sp245 | 0.12 | AZOBR_RS29430 | | hemin ABC transporter substrate-binding protein | 0.13 | AZOBR_RS09025 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 97 |
Sinorhizobium meliloti 1021 | 0.12 | SMc01512 | | hemin binding periplasmic transmembrane protein | 0.15 | SMc03974 | | hypothetical protein | low | > 103 |
Rhodanobacter denitrificans MT42 | 0.11 | LRK55_RS04045 | | ABC transporter substrate-binding protein | 0.23 | LRK55_RS11395 | | 5-formyltetrahydrofolate cyclo-ligase | low | > 63 |
Not shown: 34 genomes with orthologs for Sama_2869 only; 12 genomes with orthologs for Sama_2726 only