Conservation of cofitness between Shew_2451 and Shew_1343 in Shewanella loihica PV-4

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2451 patatin (RefSeq) 1.0 Shew_1343 response regulator receiver modulated CheW protein (RefSeq) 0.40 7
Shewanella amazonensis SB2B 0.64 Sama_1274 hypothetical protein (RefSeq) 0.92 Sama_2320 chemotaxis protein CheV (RefSeq) low > 62
Shewanella sp. ANA-3 0.58 Shewana3_2605 patatin (RefSeq) 0.93 Shewana3_1319 response regulator receiver modulated CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO2836 conserved hypothetical protein (NCBI ptt file) 0.92 SO3252 cheV-3 chemotaxis protein CheV (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS11055 patatin-like phospholipase RssA 0.28 HER17_RS13880 chemotaxis protein low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS10335 patatin-like phospholipase RssA 0.29 DDA3937_RS08090 chemotaxis protein CheV low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS10345 patatin-like phospholipase RssA 0.29 HGI48_RS07815 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.40 DZA65_RS10820 patatin-like phospholipase RssA 0.29 DZA65_RS08410 chemotaxis protein CheV low > 75
Pantoea agglomerans CFBP13505 P0401 0.39 PagCFBP13505_RS02860 patatin-like phospholipase RssA 0.28 PagCFBP13505_RS10095 chemotaxis protein CheV low > 74
Rahnella sp. WP5 0.39 EX31_RS10105 patatin-like phospholipase RssA 0.28 EX31_RS11205 chemotaxis protein CheV low > 89
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0860 Predicted esterase of the alpha-beta hydrolase superfamily 0.29 EX28DRAFT_0335 Chemotaxis signal transduction protein low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_02594 putative NTE family protein 0.30 MPMX20_03205 Chemotaxis protein CheV low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2754 UPF0028 protein YchK 0.27 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) low > 78
Alteromonas macleodii MIT1002 0.38 MIT1002_02140 NTE family protein RssA 0.72 MIT1002_01037 Chemotaxis protein CheV low > 70
Dechlorosoma suillum PS 0.32 Dsui_2541 putative esterase of the alpha-beta hydrolase superfamily 0.35 Dsui_1717 chemotaxis signal transduction protein low > 51
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2206 UPF0028 protein YchK 0.58 PfGW456L13_1999 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_310 UPF0028 protein YchK 0.58 Pf1N1B4_3470 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas simiae WCS417 0.27 PS417_08310 alpha/beta hydrolase 0.58 PS417_21580 chemotaxis protein CheW low > 88
Pseudomonas sp. S08-1 0.27 OH686_01880 Bacterial patatin-like phospholipase domain containing protein 0.60 OH686_02985 Chemotaxis protein CheV low > 80
Pseudomonas fluorescens SBW25 0.27 PFLU_RS08250 alpha/beta hydrolase 0.58 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS08250 alpha/beta hydrolase 0.58 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas putida KT2440 0.27 PP_2305 conserved protein of unknown function 0.57 PP_4393 putative chemotaxis protein low > 96
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_01791 putative NTE family protein 0.58 GEMAOFIL_04459 Chemotaxis protein CheV low > 96
Pseudomonas orientalis W4I3 0.26 QF045_RS11025 patatin-like phospholipase family protein 0.58 QF045_RS23665 chemotaxis protein CheV low > 93
Pseudomonas sp. DMC3 0.26 GFF4641 putative NTE family protein 0.57 GFF4852 Chemotaxis protein CheV 0.60 24
Pseudomonas sp. BP01 0.26 JOY50_RS25890 patatin-like phospholipase family protein 0.57 JOY50_RS00805 chemotaxis protein CheV — —
Pseudomonas stutzeri RCH2 0.26 Psest_2463 Predicted esterase of the alpha-beta hydrolase superfamily 0.54 Psest_2970 Chemotaxis signal transduction protein low > 67
Pseudomonas segetis P6 0.26 MPMX49_02675 putative NTE family protein 0.57 MPMX49_03170 Chemotaxis protein CheV low > 75
Pseudomonas sp. SVBP6 0.26 COO64_RS09710 patatin-like phospholipase family protein 0.58 COO64_RS21410 chemotaxis protein CheV low > 93
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_18940 alpha/beta hydrolase 0.57 AO353_02870 chemotaxis protein CheW low > 101
Pseudomonas aeruginosa PUPa3 0.25 DQ20_RS53955 patatin-like phospholipase family protein 0.60 DQ20_RS40895 chemotaxis protein CheV low > 101
Pseudomonas aeruginosa PA14 0.25 IKLFDK_07865 alpha/beta hydrolase 0.60 IKLFDK_17170 chemotaxis protein low > 98
Pseudomonas aeruginosa MRSN321 0.25 DY961_RS19850 patatin-like phospholipase family protein 0.60 DY961_RS00115 chemotaxis protein CheV low > 100
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15480 Serine protease 0.41 OKGIIK_02645 Chemotaxis protein low > 53
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS02520 patatin-like phospholipase family protein 0.41 LRK53_RS15180 chemotaxis protein low > 59
Pseudomonas sp. RS175 0.25 PFR28_00944 putative NTE family protein 0.57 PFR28_03256 Chemotaxis protein CheV low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2489 UPF0028 protein YchK 0.57 Pf6N2E2_5692 Chemotaxis protein CheV (EC 2.7.3.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_03290 alpha/beta hydrolase 0.58 AO356_18905 chemotaxis protein CheW low > 104
Rhodanobacter denitrificans MT42 0.24 LRK55_RS08480 patatin-like phospholipase family protein 0.41 LRK55_RS13140 chemotaxis protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS08715 patatin-like phospholipase family protein 0.41 LRK54_RS13400 chemotaxis protein low > 59
Marinobacter adhaerens HP15 0.23 HP15_1840 patatin 0.53 HP15_1547 response regulator receiver modulated CheW protein low > 73

Not shown: 33 genomes with orthologs for Shew_2451 only; 15 genomes with orthologs for Shew_1343 only