Conservation of cofitness between Shew_1150 and Shew_1149 in Shewanella loihica PV-4

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1150 transmembrane pair domain-containing protein (RefSeq) 1.0 Shew_1149 LysR family transcriptional regulator (RefSeq) 0.89 1
Pectobacterium carotovorum WPP14 0.43 HER17_RS17110 multidrug/biocide efflux PACE transporter 0.20 HER17_RS17115 LysR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS04510 multidrug/biocide efflux PACE transporter 0.21 HGI48_RS04505 LysR family transcriptional regulator low > 71
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2925 Predicted membrane protein 0.21 EX28DRAFT_2924 Transcriptional regulator low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS04430 multidrug/biocide efflux PACE transporter 0.21 DZA65_RS04425 LysR family transcriptional regulator low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03721 hypothetical protein 0.22 MPMX20_03720 HTH-type transcriptional regulator HdfR 0.46 1
Dickeya dadantii 3937 0.39 DDA3937_RS04550 multidrug/biocide efflux PACE transporter 0.21 DDA3937_RS04545 LysR family transcriptional regulator low > 74
Pantoea sp. MT58 0.39 IAI47_14420 multidrug/biocide efflux PACE transporter 0.21 IAI47_14415 LysR family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.39 IAI46_18230 multidrug/biocide efflux PACE transporter 0.19 IAI46_06790 LysR family transcriptional regulator low > 86
Rahnella sp. WP5 0.38 EX31_RS20050 multidrug/biocide efflux PACE transporter 0.22 EX31_RS20055 LysR family transcriptional regulator low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF1332 FIG01045951: hypothetical protein 0.19 GFF1331 LysR-family transcriptional regulator STM3020 low > 78
Klebsiella michiganensis M5al 0.36 BWI76_RS23455 Na(+)-translocating NADH-quinone reductase subunit E 0.21 BWI76_RS23450 LysR family transcriptional regulator 0.16 31
Pseudomonas simiae WCS417 0.35 PS417_21930 membrane protein 0.26 PS417_02340 LysR family transcriptional regulator low > 88
Castellaniella sp019104865 MT123 0.35 ABCV34_RS15805 multidrug/biocide efflux PACE transporter 0.31 ABCV34_RS09070 LysR family transcriptional regulator low > 48
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03190 hypothetical protein 0.26 AO353_12995 LysR family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3358 transmembrane pair 0.20 Psyr_3357 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3358 transmembrane pair 0.20 Psyr_3357 transcriptional regulator, LysR family 0.34 59
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_3401 FIG00961830: hypothetical protein 0.26 Pf1N1B4_1450 LysR family transcriptional regulator PA4989 low > 87
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS17690 multidrug/biocide efflux PACE transporter 0.19 ABZR87_RS17685 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS06805 membrane protein 0.21 RPSI07_RS06810 LysR family transcriptional regulator low > 81
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1938 FIG00961830: hypothetical protein 0.26 PfGW456L13_190 LysR family transcriptional regulator PA4989 low > 87
Ralstonia solanacearum UW163 0.32 UW163_RS18000 membrane protein 0.20 UW163_RS17995 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS16645 membrane protein 0.20 RALBFv3_RS16640 LysR family transcriptional regulator low > 76
Sinorhizobium meliloti 1021 0.32 SMa1780 hypothetical protein 0.26 SMa1782 LysR family transcriptional regulator low > 103
Ralstonia solanacearum GMI1000 0.30 RS_RS24415 membrane protein 0.20 RS_RS24420 LysR family transcriptional regulator low > 80
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_92 hypothetical protein 0.26 Pf6N2E2_3647 LysR family transcriptional regulator PA4989 low > 103
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3276 hypothetical protein 0.19 Ac3H11_3277 LysR family transcriptional regulator PA2758 0.75 1
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_21560 hypothetical protein 0.26 AO356_08825 LysR family transcriptional regulator low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF2843 FIG00455451: hypothetical protein 0.22 GFF2844 LysR family transcriptional regulator PA2758 low > 90
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU0308 membrane protein, putative (TIGR) 0.26 DVU0309 transcriptional regulator, LysR family (TIGR) low > 55
Variovorax sp. OAS795 0.26 ABID97_RS03465 PACE efflux transporter 0.22 ABID97_RS03460 LysR family transcriptional regulator low > 91
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS22620 membrane protein 0.19 HSERO_RS22625 LysR family transcriptional regulator low > 78

Not shown: 5 genomes with orthologs for Shew_1150 only; 16 genomes with orthologs for Shew_1149 only