Conservation of cofitness between Shew_1150 and Shew_0467 in Shewanella loihica PV-4

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1150 transmembrane pair domain-containing protein (RefSeq) 1.0 Shew_0467 RND family efflux transporter MFP subunit (RefSeq) 0.33 16
Pectobacterium carotovorum WPP14 0.43 HER17_RS17110 multidrug/biocide efflux PACE transporter 0.16 HER17_RS07495 efflux RND transporter periplasmic adaptor subunit low > 75
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2925 Predicted membrane protein 0.25 EX28DRAFT_0560 RND family efflux transporter, MFP subunit 0.56 9
Dickeya dianthicola ME23 0.40 DZA65_RS04430 multidrug/biocide efflux PACE transporter 0.18 DZA65_RS08240 efflux RND transporter periplasmic adaptor subunit low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03721 hypothetical protein 0.13 MPMX20_02161 Multidrug resistance protein MdtA low > 85
Dickeya dadantii 3937 0.39 DDA3937_RS04550 multidrug/biocide efflux PACE transporter 0.14 DDA3937_RS04725 efflux RND transporter periplasmic adaptor subunit low > 74
Pantoea sp. MT58 0.39 IAI47_14420 multidrug/biocide efflux PACE transporter 0.15 IAI47_21720 efflux RND transporter periplasmic adaptor subunit low > 76
Rahnella sp. WP5 0.38 EX31_RS20050 multidrug/biocide efflux PACE transporter 0.27 EX31_RS02980 efflux RND transporter periplasmic adaptor subunit low > 89
Pseudomonas putida KT2440 0.36 PP_3512 conserved membrane protein of unknown function 0.16 PP_1516 RND membrane fusion protein low > 96
Klebsiella michiganensis M5al 0.36 BWI76_RS23455 Na(+)-translocating NADH-quinone reductase subunit E 0.27 BWI76_RS18510 membrane protein low > 92
Pseudomonas simiae WCS417 0.35 PS417_21930 membrane protein 0.18 PS417_06110 RND transporter low > 88
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03190 hypothetical protein 0.16 AO353_16360 RND transporter low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3358 transmembrane pair 0.16 Psyr_0344 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3358 transmembrane pair 0.16 Psyr_0344 Secretion protein HlyD low > 86
Marinobacter adhaerens HP15 0.34 HP15_643 transmembrane pair domain protein 0.13 HP15_3036 efflux transporter, RND family, MFP subunit low > 73
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_3401 FIG00961830: hypothetical protein 0.18 Pf1N1B4_3062 RND efflux membrane fusion protein low > 87
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS17690 multidrug/biocide efflux PACE transporter 0.16 ABZR87_RS13185 efflux RND transporter periplasmic adaptor subunit low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS06805 membrane protein 0.16 RPSI07_RS16095 efflux RND transporter periplasmic adaptor subunit low > 81
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1938 FIG00961830: hypothetical protein 0.17 PfGW456L13_4731 RND efflux membrane fusion protein low > 87
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS16645 membrane protein 0.16 RALBFv3_RS01390 efflux RND transporter periplasmic adaptor subunit low > 76
Ralstonia solanacearum UW163 0.32 UW163_RS18000 membrane protein 0.16 UW163_RS14700 efflux RND transporter periplasmic adaptor subunit — —
Sinorhizobium meliloti 1021 0.32 SMa1780 hypothetical protein 0.18 SM_b20346 efflux protein low > 103
Ralstonia solanacearum GMI1000 0.30 RS_RS24415 membrane protein 0.16 RS_RS08330 efflux RND transporter periplasmic adaptor subunit low > 80
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3276 hypothetical protein 0.14 Ac3H11_932 Probable Co/Zn/Cd efflux system membrane fusion protein low > 79
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_92 hypothetical protein 0.17 Pf6N2E2_3950 Efflux membrane fusion protein, RND family low > 103
Variovorax sp. SCN45 0.29 GFF6396 hypothetical protein 0.13 GFF494 RND efflux system, membrane fusion protein low > 127
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_21560 hypothetical protein 0.17 AO356_06135 RND transporter low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF2843 FIG00455451: hypothetical protein 0.15 GFF4032 Probable Co/Zn/Cd efflux system membrane fusion protein 0.43 60
Acinetobacter radioresistens SK82 0.27 MPMX26_01751 hypothetical protein 0.15 MPMX26_03011 Multidrug resistance protein MdtA low > 36
Variovorax sp. OAS795 0.26 ABID97_RS03465 PACE efflux transporter 0.14 ABID97_RS17620 efflux RND transporter periplasmic adaptor subunit low > 91
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS22620 membrane protein 0.14 HSERO_RS01320 RND transporter MFP subunit low > 78
Dechlorosoma suillum PS 0.23 Dsui_0787 putative membrane protein 0.20 Dsui_0409 RND family efflux transporter, MFP subunit low > 51

Not shown: 5 genomes with orthologs for Shew_1150 only; 33 genomes with orthologs for Shew_0467 only