Conservation of cofitness between SO0873 and SO0919 in Shewanella oneidensis MR-1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 1.0 SO0919 serine transporter, putative (NCBI ptt file) 0.29 15
Shewanella sp. ANA-3 0.90 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.98 Shewana3_3365 serine transporter, putative (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.81 Sama_2772 amino acid transporter, transmembrane (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3130 glutamate--tRNA ligase (RefSeq) 0.84 Shew_0739 aromatic amino acid permease (RefSeq) 0.36 45
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.52 EX28DRAFT_2878 serine transporter low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.53 MPMX20_03666 Serine transporter low > 85
Escherichia coli BL21 0.50 ECD_00143 glutamyl-Q tRNA(Asp) synthetase 0.53 ECD_02641 putative serine transporter low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase 0.53 OHPLBJKB_00935 Serine transporter low > 74
Escherichia coli BW25113 0.50 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) 0.53 b2796 sdaC predicted serine transporter (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 NOLOHH_12060 sdaC HAAAP family serine/threonine permease SdaC low > 76
Escherichia coli ECRC101 0.50 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 MCAODC_10705 sdaC HAAAP family serine/threonine permease SdaC low > 88
Escherichia coli ECRC99 0.50 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 KEDOAH_07950 sdaC HAAAP family serine/threonine permease SdaC — —
Escherichia coli ECRC100 0.50 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 OKFHMN_20180 sdaC HAAAP family serine/threonine permease SdaC low > 79
Escherichia coli ECRC102 0.50 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 NIAGMN_17950 sdaC HAAAP family serine/threonine permease SdaC low > 80
Escherichia coli ECRC98 0.50 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 JDDGAC_23845 sdaC HAAAP family serine/threonine permease SdaC low > 87
Escherichia coli ECRC62 0.50 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 BNILDI_10565 sdaC HAAAP family serine/threonine permease SdaC low > 75
Escherichia fergusonii Becca 0.50 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase 0.53 EFB2_01121 Serine transporter low > 86
Escherichia coli ECOR38 0.50 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.53 HEPCGN_19435 sdaC HAAAP family serine/threonine permease SdaC low > 88
Escherichia coli Nissle 1917 0.50 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 ECOLIN_RS15590 HAAAP family serine/threonine permease SdaC low > 55
Klebsiella michiganensis M5al 0.49 BWI76_RS05010 tRNA glutamyl-Q synthetase 0.55 BWI76_RS14475 serine/threonine transporter low > 92
Serratia liquefaciens MT49 0.49 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.55 IAI46_08295 HAAAP family serine/threonine permease low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF88 glutamyl-Q-tRNA synthetase 0.53 GFF4852 Serine transporter low > 78
Klebsiella pneumoniae MKP103 0.48 KDGMDA_13265 tRNA glutamyl-Q(34) synthetase GluQRS 0.55 KDGMDA_03405 Serine transporter SdaC low > 95
Dickeya dianthicola 67-19 0.48 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS 0.51 HGI48_RS15195 HAAAP family serine/threonine permease low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.51 DZA65_RS16000 HAAAP family serine/threonine permease low > 75
Rahnella sp. WP5 0.47 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS 0.52 EX31_RS04220 HAAAP family serine/threonine permease low > 89
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 0.55 CSW01_08325 serine transporter low > 62
Pectobacterium carotovorum WPP14 0.47 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS 0.52 HER17_RS06465 HAAAP family serine/threonine permease low > 75
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS13360 tRNA glutamyl-Q(34) synthetase GluQRS 0.52 PagCFBP13505_RS03165 HAAAP family serine/threonine permease low > 74
Dickeya dadantii 3937 0.47 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS 0.52 DDA3937_RS15115 HAAAP family serine/threonine permease low > 74
Pantoea sp. MT58 0.47 IAI47_15640 tRNA glutamyl-Q(34) synthetase GluQRS 0.51 IAI47_14110 HAAAP family serine/threonine permease low > 76
Erwinia tracheiphila HP pepo 2.2 0.46 IJEDHG_15055 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.51 IJEDHG_09580 HAAAP family serine/threonine permease low > 61
Erwinia tracheiphila SCR3 0.46 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.51 LU632_RS24910 HAAAP family serine/threonine permease low > 74
Erwinia amylovora T8 0.46 OLJFJH_00770 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 OLJFJH_16355 HAAAP family serine/threonine permease low > 58
Pseudomonas putida KT2440 0.40 PP_4694 Glutamyl-Q tRNA(Asp) synthetase 0.52 PP_3589 serine:H+ symport permease, threonine-insensitive low > 96
Pseudomonas sp. SVBP6 0.40 COO64_RS15075 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.54 COO64_RS14550 serine/threonine transporter low > 93
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1527 glutamyl-Q-tRNA synthetase 0.49 PfGW456L13_3379 Serine transporter low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase 0.52 Pf6N2E2_563 Serine transporter low > 103
Pseudomonas sp. DMC3 0.39 GFF4033 Glutamyl-Q tRNA(Asp) synthetase 0.52 GFF1697 Serine transporter low > 89
Pseudomonas sp. BP01 0.39 JOY50_RS27690 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.51 JOY50_RS07365 serine/threonine transporter 0.52 29
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16090 glutamyl-Q tRNA(Asp) ligase 0.52 AO356_24385 serine/threonine protein kinase low > 104
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_14415 glutamyl-Q tRNA(Asp) ligase 0.53 AO353_21595 serine/threonine protein kinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase 0.53 Pf1N1B4_4562 Serine transporter — —
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_04927 Glutamyl-Q tRNA(Asp) synthetase 0.54 GEMAOFIL_03303 Serine transporter low > 93
Pseudomonas sp. RS175 0.39 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase 0.52 PFR28_02377 Serine transporter low > 88
Pseudomonas simiae WCS417 0.38 PS417_23880 glutamyl-Q tRNA(Asp) ligase 0.54 PS417_14995 serine/threonine protein kinase low > 88
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 PFLU_RS17025 HAAAP family serine/threonine permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 PFLU_RS17025 HAAAP family serine/threonine permease low > 109
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.51 Psyr_3633 threonine/serine transporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.51 Psyr_3633 threonine/serine transporter low > 86

Not shown: 35 genomes with orthologs for SO0873 only; 0 genomes with orthologs for SO0919 only