Conservation of cofitness between b4239 and b2820 in Escherichia coli BW25113

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4239 treC trehalose-6-P hydrolase (NCBI) 1.0 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) 0.33 13
Escherichia coli ECOR38 0.99 HEPCGN_10095 treC alpha,alpha-phosphotrehalase 0.99 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta low > 85
Escherichia coli ECOR27 0.99 NOLOHH_04165 treC alpha,alpha-phosphotrehalase 0.99 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta
Escherichia coli ECRC62 0.99 BNILDI_07345 treC alpha,alpha-phosphotrehalase 1.00 BNILDI_10415 recB exodeoxyribonuclease V subunit beta
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase 1.00 OHPLBJKB_00910 RecBCD enzyme subunit RecB
Escherichia coli BL21 0.99 ECD_04107 trehalose-6-P hydrolase 1.00 ECD_02668 exonuclease V (RecBCD complex), beta subunit
Escherichia coli ECRC99 0.99 KEDOAH_16255 treC alpha,alpha-phosphotrehalase 0.98 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta
Escherichia coli ECRC101 0.99 MCAODC_02405 treC alpha,alpha-phosphotrehalase 0.98 MCAODC_10575 recB exodeoxyribonuclease V subunit beta
Escherichia coli ECRC101 0.99 OKFHMN_11900 treC alpha,alpha-phosphotrehalase 0.98 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta
Escherichia coli ECRC102 0.99 NIAGMN_09750 treC alpha,alpha-phosphotrehalase 0.98 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta
Escherichia coli ECRC98 0.98 JDDGAC_15540 treC alpha,alpha-phosphotrehalase 0.98 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta
Escherichia coli Nissle 1917 0.98 ECOLIN_RS24595 alpha,alpha-phosphotrehalase 0.99 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta
Escherichia fergusonii Becca 0.98 EFB2_04294 Trehalose-6-phosphate hydrolase 0.98 EFB2_01064 RecBCD enzyme subunit RecB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.83 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5)
Klebsiella michiganensis M5al 0.85 BWI76_RS02960 glucohydrolase 0.74 BWI76_RS23230 exodeoxyribonuclease V subunit beta
Enterobacter sp. TBS_079 0.82 MPMX20_00537 Trehalose-6-phosphate hydrolase 0.77 MPMX20_03683 RecBCD enzyme subunit RecB low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3438 alpha,alpha-phosphotrehalase 0.77 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5)
Serratia liquefaciens MT49 0.74 IAI46_02150 alpha,alpha-phosphotrehalase 0.63 IAI46_20405 exodeoxyribonuclease V subunit beta
Erwinia tracheiphila SCR3 0.71 LU632_RS20965 alpha,alpha-phosphotrehalase 0.60 LU632_RS06190 recB exodeoxyribonuclease V subunit beta
Pectobacterium carotovorum WPP14 0.71 HER17_RS07195 alpha,alpha-phosphotrehalase 0.61 HER17_RS16525 exodeoxyribonuclease V subunit beta 0.61 72
Rahnella sp. WP5 0.68 EX31_RS08390 alpha,alpha-phosphotrehalase 0.31 EX31_RS20735 exodeoxyribonuclease V subunit beta low > 89
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_04665 alpha,alpha-phosphotrehalase 0.41 CSW01_11780 exodeoxyribonuclease V subunit beta
Pseudomonas simiae WCS417 0.53 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.31 PS417_23775 exodeoxyribonuclease V subunit beta low > 88
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.33 AO353_06045 exodeoxyribonuclease V subunit beta low > 101
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.32 PFLU_RS25590 exodeoxyribonuclease V subunit beta
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.32 PFLU_RS25590 exodeoxyribonuclease V subunit beta low > 109
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.33 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) 0.29 14
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS19395 alpha-amylase family glycosyl hydrolase 0.20 QEN71_RS23190 exodeoxyribonuclease V subunit beta low > 153
Pseudomonas sp. RS175 0.28 PFR28_01852 Oligo-1,6-glucosidase 1 0.32 PFR28_00007 RecBCD enzyme subunit RecB low > 88
Pseudomonas stutzeri RCH2 0.28 Psest_3785 Glycosidases 0.24 Psest_0213 exodeoxyribonuclease V, beta subunit
Lysobacter sp. OAE881 0.27 ABIE51_RS18995 alpha-glucosidase family protein 0.19 ABIE51_RS01025 exodeoxyribonuclease V subunit beta 0.73 33
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02777 alpha-glucosidase 0.21 H281DRAFT_05086 DNA helicase/exodeoxyribonuclease V, beta subunit low > 103
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS16975 alpha-glucosidase 0.27 ABZR86_RS07665 exodeoxyribonuclease V subunit beta low > 74
Shewanella loihica PV-4 0.26 Shew_1889 alpha amylase, catalytic region (RefSeq) 0.31 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq)
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_02445 amyA alpha-glucosidase 0.12 OKGIIK_09230 RecBCD enzyme subunit RecB low > 52
Rhodanobacter denitrificans MT42 0.26 LRK55_RS12785 alpha-glucosidase family protein 0.14 LRK55_RS01930 UvrD-helicase domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13085 alpha-glucosidase family protein 0.11 LRK54_RS02180 UvrD-helicase domain-containing protein low > 59
Shewanella sp. ANA-3 0.26 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.30 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq)
Shewanella amazonensis SB2B 0.26 Sama_1662 alpha amylase, catalytic region (RefSeq) 0.29 Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq)
Shewanella oneidensis MR-1 0.25 SO2213 oligo-1,6-glucosidase (NCBI ptt file) 0.30 SO2148 recB exodeoxyribonuclease V, beta subunit (NCBI ptt file)

Not shown: 19 genomes with orthologs for b4239 only; 17 genomes with orthologs for b2820 only