Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b4239 | treC | trehalose-6-P hydrolase (NCBI) | 1.0 | b2820 | recB | exonuclease V (RecBCD complex), beta subunit (NCBI) | 0.33 | 13 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_10095 | treC | alpha,alpha-phosphotrehalase | 0.99 | HEPCGN_19305 | recB | exodeoxyribonuclease V subunit beta | low | > 85 |
Escherichia coli ECOR27 | 0.99 | NOLOHH_04165 | treC | alpha,alpha-phosphotrehalase | 0.99 | NOLOHH_11935 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_07345 | treC | alpha,alpha-phosphotrehalase | 1.00 | BNILDI_10415 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_03796 | | Trehalose-6-phosphate hydrolase | 1.00 | OHPLBJKB_00910 | | RecBCD enzyme subunit RecB | — | — |
Escherichia coli BL21 | 0.99 | ECD_04107 | | trehalose-6-P hydrolase | 1.00 | ECD_02668 | | exonuclease V (RecBCD complex), beta subunit | — | — |
Escherichia coli ECRC99 | 0.99 | KEDOAH_16255 | treC | alpha,alpha-phosphotrehalase | 0.98 | KEDOAH_08080 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli ECRC101 | 0.99 | MCAODC_02405 | treC | alpha,alpha-phosphotrehalase | 0.98 | MCAODC_10575 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli ECRC101 | 0.99 | OKFHMN_11900 | treC | alpha,alpha-phosphotrehalase | 0.98 | OKFHMN_20050 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli ECRC102 | 0.99 | NIAGMN_09750 | treC | alpha,alpha-phosphotrehalase | 0.98 | NIAGMN_17820 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli ECRC98 | 0.98 | JDDGAC_15540 | treC | alpha,alpha-phosphotrehalase | 0.98 | JDDGAC_23715 | recB | exodeoxyribonuclease V subunit beta | — | — |
Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS24595 | | alpha,alpha-phosphotrehalase | 0.99 | ECOLIN_RS15830 | | exodeoxyribonuclease V subunit beta | — | — |
Escherichia fergusonii Becca | 0.98 | EFB2_04294 | | Trehalose-6-phosphate hydrolase | 0.98 | EFB2_01064 | | RecBCD enzyme subunit RecB | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF921 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | 0.83 | GFF1301 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | — | — |
Klebsiella michiganensis M5al | 0.85 | BWI76_RS02960 | | glucohydrolase | 0.74 | BWI76_RS23230 | | exodeoxyribonuclease V subunit beta | — | — |
Enterobacter sp. TBS_079 | 0.82 | MPMX20_00537 | | Trehalose-6-phosphate hydrolase | 0.77 | MPMX20_03683 | | RecBCD enzyme subunit RecB | low | > 85 |
Enterobacter asburiae PDN3 | 0.82 | EX28DRAFT_3438 | | alpha,alpha-phosphotrehalase | 0.77 | EX28DRAFT_2895 | | DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) | — | — |
Serratia liquefaciens MT49 | 0.74 | IAI46_02150 | | alpha,alpha-phosphotrehalase | 0.63 | IAI46_20405 | | exodeoxyribonuclease V subunit beta | — | — |
Erwinia tracheiphila SCR3 | 0.71 | LU632_RS20965 | | alpha,alpha-phosphotrehalase | 0.60 | LU632_RS06190 | recB | exodeoxyribonuclease V subunit beta | — | — |
Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS07195 | | alpha,alpha-phosphotrehalase | 0.61 | HER17_RS16525 | | exodeoxyribonuclease V subunit beta | 0.61 | 72 |
Rahnella sp. WP5 | 0.68 | EX31_RS08390 | | alpha,alpha-phosphotrehalase | 0.31 | EX31_RS20735 | | exodeoxyribonuclease V subunit beta | low | > 89 |
Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_04665 | | alpha,alpha-phosphotrehalase | 0.41 | CSW01_11780 | | exodeoxyribonuclease V subunit beta | — | — |
Pseudomonas simiae WCS417 | 0.53 | PS417_23045 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.31 | PS417_23775 | | exodeoxyribonuclease V subunit beta | low | > 88 |
Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_15985 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.33 | AO353_06045 | | exodeoxyribonuclease V subunit beta | low | > 101 |
Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | — | — |
Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | low | > 109 |
Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_835 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | 0.33 | Pf1N1B4_1235 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | 0.29 | 14 |
Paraburkholderia sabiae LMG 24235 | 0.29 | QEN71_RS19395 | | alpha-amylase family glycosyl hydrolase | 0.20 | QEN71_RS23190 | | exodeoxyribonuclease V subunit beta | low | > 153 |
Pseudomonas sp. RS175 | 0.28 | PFR28_01852 | | Oligo-1,6-glucosidase 1 | 0.32 | PFR28_00007 | | RecBCD enzyme subunit RecB | low | > 88 |
Pseudomonas stutzeri RCH2 | 0.28 | Psest_3785 | | Glycosidases | 0.24 | Psest_0213 | | exodeoxyribonuclease V, beta subunit | — | — |
Lysobacter sp. OAE881 | 0.27 | ABIE51_RS18995 | | alpha-glucosidase family protein | 0.19 | ABIE51_RS01025 | | exodeoxyribonuclease V subunit beta | 0.73 | 33 |
Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_02777 | | alpha-glucosidase | 0.21 | H281DRAFT_05086 | | DNA helicase/exodeoxyribonuclease V, beta subunit | low | > 103 |
Dyella japonica UNC79MFTsu3.2 | 0.26 | ABZR86_RS16975 | | alpha-glucosidase | 0.27 | ABZR86_RS07665 | | exodeoxyribonuclease V subunit beta | low | > 74 |
Shewanella loihica PV-4 | 0.26 | Shew_1889 | | alpha amylase, catalytic region (RefSeq) | 0.31 | Shew_2130 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
Rhodanobacter sp. FW510-T8 | 0.26 | OKGIIK_02445 | amyA | alpha-glucosidase | 0.12 | OKGIIK_09230 | | RecBCD enzyme subunit RecB | low | > 52 |
Rhodanobacter denitrificans MT42 | 0.26 | LRK55_RS12785 | | alpha-glucosidase family protein | 0.14 | LRK55_RS01930 | | UvrD-helicase domain-containing protein | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.26 | LRK54_RS13085 | | alpha-glucosidase family protein | 0.11 | LRK54_RS02180 | | UvrD-helicase domain-containing protein | low | > 59 |
Shewanella sp. ANA-3 | 0.26 | Shewana3_2311 | | Alpha-glucosidase (EC 3.2.1.20) (from data) | 0.30 | Shewana3_2246 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.26 | Sama_1662 | | alpha amylase, catalytic region (RefSeq) | 0.29 | Sama_1901 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.25 | SO2213 | | oligo-1,6-glucosidase (NCBI ptt file) | 0.30 | SO2148 | recB | exodeoxyribonuclease V, beta subunit (NCBI ptt file) | — | — |
Not shown: 19 genomes with orthologs for b4239 only; 17 genomes with orthologs for b2820 only