Conservation of cofitness between b2210 and b0428 in Escherichia coli BW25113

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2210 mqo malate:quinone oxidoreductase (NCBI) 1.0 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.32 7
Escherichia coli ECOR38 1.00 HEPCGN_22490 mqo malate dehydrogenase (quinone) 1.00 HEPCGN_06995 cyoE heme o synthase low > 85
Escherichia coli ECRC101 1.00 MCAODC_14275 mqo malate dehydrogenase (quinone) 1.00 MCAODC_27605 cyoE heme o synthase — —
Escherichia coli ECRC102 1.00 NIAGMN_20990 mqo malate dehydrogenase (quinone) 1.00 NIAGMN_06435 cyoE heme o synthase — —
Escherichia coli ECRC62 1.00 BNILDI_13720 mqo malate dehydrogenase (quinone) 1.00 BNILDI_22730 cyoE heme o synthase — —
Escherichia coli ECRC98 1.00 JDDGAC_27185 mqo malate dehydrogenase (quinone) 1.00 JDDGAC_12035 cyoE heme o synthase — —
Escherichia coli ECOR27 1.00 NOLOHH_14800 mqo malate dehydrogenase (quinone) 1.00 NOLOHH_01315 cyoE heme o synthase low > 57
Escherichia coli ECRC99 1.00 KEDOAH_04960 mqo malate dehydrogenase (quinone) 1.00 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECRC101 1.00 OKFHMN_23225 mqo malate dehydrogenase (quinone) 1.00 OKFHMN_08380 cyoE heme o synthase — —
Escherichia coli BL21 0.99 ECD_02137 malate dehydrogenase, FAD/NAD(P)-binding domain 1.00 ECD_00379 protoheme IX farnesyltransferase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01500 Malate:quinone oxidoreductase 1.00 OHPLBJKB_03245 Protoheme IX farnesyltransferase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12910 malate dehydrogenase (quinone) 1.00 ECOLIN_RS02575 heme o synthase low > 52
Escherichia fergusonii Becca 0.99 EFB2_01645 Malate:quinone oxidoreductase 1.00 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Enterobacter asburiae PDN3 0.86 EX28DRAFT_0368 malate:quinone-oxidoreductase 0.95 EX28DRAFT_2543 protoheme IX farnesyltransferase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_03168 Malate:quinone oxidoreductase 0.94 MPMX20_01019 Protoheme IX farnesyltransferase low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS19870 malate:quinone oxidoreductase 0.95 BWI76_RS06475 protoheme IX farnesyltransferase low > 92
Rahnella sp. WP5 0.73 EX31_RS05365 malate:quinone oxidoreductase 0.82 EX31_RS22200 protoheme IX farnesyltransferase low > 89
Pectobacterium carotovorum WPP14 0.68 HER17_RS06860 malate dehydrogenase (quinone) 0.84 HER17_RS15895 heme o synthase low > 75
Serratia liquefaciens MT49 0.68 IAI46_07765 malate:quinone oxidoreductase 0.87 IAI46_04965 protoheme IX farnesyltransferase low > 86
Dickeya dadantii 3937 0.67 DDA3937_RS14620 malate dehydrogenase (quinone) 0.83 DDA3937_RS05595 protoheme IX farnesyltransferase low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS14570 malate dehydrogenase (quinone) 0.83 HGI48_RS05640 protoheme IX farnesyltransferase low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS15510 malate dehydrogenase (quinone) 0.83 DZA65_RS05965 protoheme IX farnesyltransferase low > 75
Erwinia tracheiphila SCR3 0.66 LU632_RS19735 mqo malate dehydrogenase (quinone) 0.87 LU632_RS18395 cyoE heme o synthase — —
Pseudomonas putida KT2440 0.65 PP_1251 malate:quinone oxidoreductase 0.66 PP_0816 protoheme IX farnesyltransferase — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS21125 malate:quinone oxidoreductase 0.24 HSERO_RS20745 protoheme IX farnesyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_1377 Malate:quinone oxidoreductase (EC 1.1.5.4) 0.66 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 103
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_28005 malate:quinone oxidoreductase 0.66 AO356_16980 protoheme IX farnesyltransferase low > 104
Pantoea sp. MT58 0.65 IAI47_20405 malate dehydrogenase (quinone) 0.86 IAI47_14700 protoheme IX farnesyltransferase low > 76
Pseudomonas sp. RS175 0.65 PFR28_01823 Malate:quinone oxidoreductase 0.66 PFR28_00246 Protoheme IX farnesyltransferase low > 88
Ralstonia solanacearum GMI1000 0.65 RS_RS21010 malate dehydrogenase (quinone) 0.24 RS_RS01830 protoheme IX farnesyltransferase low > 80
Ralstonia solanacearum UW163 0.65 UW163_RS19360 malate dehydrogenase (quinone) 0.24 UW163_RS02590 protoheme IX farnesyltransferase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS19815 malate dehydrogenase (quinone) 0.24 RALBFv3_RS10990 protoheme IX farnesyltransferase low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_2387 Malate:quinone-oxidoreductase 0.68 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_2387 Malate:quinone-oxidoreductase 0.68 Psyr_1145 Protoheme IX farnesyltransferase — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS03370 malate dehydrogenase (quinone) 0.24 RPSI07_RS22315 protoheme IX farnesyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_28515 malate:quinone oxidoreductase 0.67 AO353_15470 protoheme IX farnesyltransferase low > 101
Pseudomonas simiae WCS417 0.64 PS417_07955 malate:quinone oxidoreductase 0.67 PS417_23370 protoheme IX farnesyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS07940 malate dehydrogenase (quinone) 0.67 PFLU_RS25200 protoheme IX farnesyltransferase low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS07940 malate dehydrogenase (quinone) 0.67 PFLU_RS25200 protoheme IX farnesyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_3724 Malate:quinone oxidoreductase (EC 1.1.5.4) 0.67 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 87
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_4189 Malate:quinone oxidoreductase (EC 1.1.5.4) 0.66 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 87
Agrobacterium fabrum C58 0.62 Atu0811 malate:quinone oxidoreductase 0.18 Atu0769 protoheme IX farnesyltransferase low > 89
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_17245 malate:quinone oxidoreductase 0.13 CA264_01325 protoheme IX farnesyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS17145 malate:quinone oxidoreductase 0.14 CA265_RS17805 protoheme IX farnesyltransferase — —
Rhodopseudomonas palustris CGA009 0.47 TX73_006835 malate dehydrogenase (quinone) 0.19 TX73_004295 heme o synthase low > 86
Marinobacter adhaerens HP15 0.47 HP15_3121 malate:quinone oxidoreductase 0.28 HP15_3780 protoheme IX farnesyltransferase low > 73
Pseudomonas stutzeri RCH2 0.46 Psest_3238 malate:quinone-oxidoreductase 0.28 Psest_4334 protoheme IX farnesyltransferase — —

Not shown: 3 genomes with orthologs for b2210 only; 38 genomes with orthologs for b0428 only