Conservation of cofitness between Rru_A1438 and Rru_A2109 in Rhodospirillum rubrum S1H

32 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Rhodospirillum rubrum S1H	1.0	Rru_A1438		Sigma-24 (FecI) (NCBI)	1.0	Rru_A2109		ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI)	0.83	1
Pseudomonas fluorescens GW456-L13	0.44	PfGW456L13_2727		FIG006045: Sigma factor, ECF subfamily	0.60	PfGW456L13_2646		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 87
Azospirillum brasilense Sp245	0.38	AZOBR_RS27315		RNA polymerase sigma 70	0.77	AZOBR_RS05175		ATP-dependent Clp protease ATP-binding protein	low	> 97
Azospirillum sp. SherDot2	0.37	MPMX19_03088		putative RNA polymerase sigma factor FecI	0.76	MPMX19_00503		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 112
Pseudomonas fluorescens FW300-N2E2	0.29	Pf6N2E2_21		Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis	0.60	Pf6N2E2_292		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 103
Pseudomonas sp. RS175	0.29	PFR28_02867		putative RNA polymerase sigma factor FecI	0.61	PFR28_02613		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 88
Pseudomonas simiae WCS417	0.29	PS417_17630		RNA polymerase sigma factor	0.61	PS417_16510		Clp protease ClpX	low	> 88
Pseudomonas fluorescens FW300-N1B4	0.29	Pf1N1B4_133		Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis	0.60	Pf1N1B4_4055		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 87
Pseudomonas fluorescens SBW25	0.28	PFLU_RS19420		sigma-70 family RNA polymerase sigma factor	0.60	PFLU_RS18550		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 109
Pseudomonas fluorescens SBW25-INTG	0.28	PFLU_RS19420		sigma-70 family RNA polymerase sigma factor	0.60	PFLU_RS18550		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 109
Pseudomonas fluorescens FW300-N2C3	0.28	AO356_22495		RNA polymerase subunit sigma-24	0.60	AO356_22150		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 104
Variovorax sp. SCN45	0.28	GFF791		RNA polymerase sigma factor RpoE	0.58	GFF341		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 127
Dyella japonica UNC79MFTsu3.2	0.27	ABZR86_RS00640		sigma-70 family RNA polymerase sigma factor	0.59	ABZR86_RS02200		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 74
Ralstonia solanacearum GMI1000	0.26	RS_RS14615		RNA polymerase sigma factor	0.58	RS_RS12370		ATP-dependent Clp protease ATP-binding subunit ClpA	—	—
Pectobacterium carotovorum WPP14	0.26	HER17_RS14055		sigma-70 family RNA polymerase sigma factor	0.58	HER17_RS12400		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 75
Ralstonia solanacearum IBSBF1503	0.26	RALBFv3_RS06665		RNA polymerase sigma factor	0.58	RALBFv3_RS04810		ATP-dependent Clp protease ATP-binding subunit ClpA	—	—
Ralstonia solanacearum UW163	0.26	UW163_RS06960		RNA polymerase sigma factor	0.58	UW163_RS08860		ATP-dependent Clp protease ATP-binding subunit ClpA	—	—
Sphingomonas koreensis DSMZ 15582	0.26	Ga0059261_3549		RNA polymerase sigma factor, sigma-70 family	0.68	Ga0059261_1001		ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92)	low	> 68
Rhodanobacter denitrificans FW104-10B01	0.26	LRK54_RS09420		RNA polymerase sigma factor	0.58	LRK54_RS00420		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 59
Dechlorosoma suillum PS	0.26	Dsui_1673		RNA polymerase sigma factor, sigma-70 family	0.60	Dsui_0009		ATP-dependent Clp protease ATP-binding subunit clpA	—	—
Ralstonia solanacearum PSI07	0.26	RPSI07_RS10560		RNA polymerase sigma factor	0.58	RPSI07_RS12575		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 81
Cupriavidus basilensis FW507-4G11	0.24	RR42_RS14885		DNA-directed RNA polymerase sigma-70 factor	0.58	RR42_RS17105		Clp protease ClpX	low	> 128
Agrobacterium fabrum C58	0.24	Atu3692		sigma factor	0.69	Atu1364		ATP-dependent Clp protease, ATP-binding subunit	low	> 89
Caulobacter crescentus NA1000 Δfur	0.24	CCNA_01187		RNA polymerase ECF-type sigma factor	0.70	CCNA_02553		ATP-dependent clp protease ATP-binding subunit ClpA	low	> 67
Caulobacter crescentus NA1000	0.24	CCNA_01187		RNA polymerase ECF-type sigma factor	0.70	CCNA_02553		ATP-dependent clp protease ATP-binding subunit ClpA	low	> 66
Hydrogenophaga sp. GW460-11-11-14-LB1	0.24	GFF1181		FIG006045: Sigma factor, ECF subfamily	0.58	GFF4521		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 90
Rhodopseudomonas palustris CGA009	0.22	TX73_006850		RNA polymerase sigma factor	0.71	TX73_016270		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 86
Pseudomonas stutzeri RCH2	0.22	Psest_4339		DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog	0.60	Psest_2027		ATP-dependent Clp protease ATP-binding subunit clpA	low	> 67
Phocaeicola vulgatus CL09T03C04	0.21	HMPREF1058_RS05630		RNA polymerase sigma-70 factor	0.37	HMPREF1058_RS09040		AAA family ATPase	low	> 67
Variovorax sp. OAS795	0.20	ABID97_RS21425		sigma-70 family RNA polymerase sigma factor	0.57	ABID97_RS16910		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 91
Dickeya dadantii 3937	0.19	DDA3937_RS03525		sigma-70 family RNA polymerase sigma factor	0.58	DDA3937_RS09560		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 74
Rahnella sp. WP5	0.18	EX31_RS16485		sigma-70 family RNA polymerase sigma factor	0.58	EX31_RS18560		ATP-dependent Clp protease ATP-binding subunit ClpA	low	> 89
Phocaeicola dorei CL03T12C01	0.18	ABI39_RS04680		RNA polymerase sigma factor	0.37	ABI39_RS03345		AAA family ATPase	low	> 72

Not shown: 4 genomes with orthologs for Rru_A1438 only; 56 genomes with orthologs for Rru_A2109 only