| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A0658 | | Transcriptional Regulator, LysR family (NCBI) | 1.0 | Rru_A1904 | | inner-membrane translocator (NCBI) | 0.61 | 7 |
| Agrobacterium fabrum C58 | 0.66 | Atu0928 | | transcriptional regulator, LysR family | 0.48 | Atu1791 | | ABC transporter, membrane spanning protein (sugar) | low | > 89 |
| Azospirillum sp. SherDot2 | 0.50 | MPMX19_01759 | | putative HTH-type transcriptional regulator | 0.59 | MPMX19_01712 | | hypothetical protein | low | > 112 |
| Azospirillum brasilense Sp245 | 0.47 | AZOBR_RS01600 | | LysR family transcriptional regulator | 0.59 | AZOBR_RS06955 | | sugar ABC transporter permease | low | > 97 |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_0711 | | transcriptional regulator, LysR family (RefSeq) | 0.48 | Dshi_2962 | | inner-membrane translocator (RefSeq) | low | > 64 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF5065 | | Chromosome initiation inhibitor | 0.53 | GFF206 | | Nucleoside ABC transporter, permease protein 1 | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS23875 | | LysR family transcriptional regulator ArgP | 0.53 | ABID97_RS22100 | | ABC transporter permease | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS03900 | | transcriptional regulator ArgP | 0.49 | RPSI07_RS13765 | | ABC transporter permease | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_001719 | | LysR family transcriptional regulator (chromosome initiation inhibitor) | 0.52 | ABIE53_002383 | | ABC-type uncharacterized transport system permease subunit | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS23610 | | LysR family transcriptional regulator ArgP | 0.53 | QEN71_RS07065 | | ABC transporter permease | low | > 153 |
| Phaeobacter inhibens DSM 17395 | 0.44 | PGA1_c21740 | | transcriptional regulator, ArgP family | 0.46 | PGA1_c28140 | | ABC transporter, permease protein | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS07440 | | LysR family transcriptional regulator | 0.53 | BPHYT_RS11505 | | sugar ABC transporter permease | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_04882 | | transcriptional regulator, LysR family | 0.52 | H281DRAFT_05167 | | nucleoside ABC transporter membrane protein | — | — |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS20770 | | transcriptional regulator ArgP | 0.50 | UW163_RS10220 | | ABC transporter permease | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS18360 | | transcriptional regulator ArgP | 0.50 | RALBFv3_RS03450 | | ABC transporter permease | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.43 | ABZR87_RS14025 | | LysR family transcriptional regulator ArgP | 0.49 | ABZR87_RS15350 | | ABC transporter permease | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS31465 | | LysR family transcriptional regulator | 0.46 | RR42_RS04795 | | sugar ABC transporter permease | low | > 128 |
| Variovorax sp. SCN45 | 0.41 | GFF2318 | | Transcriptional regulator ArgP, LysR family | 0.52 | GFF1845 | | Nucleoside ABC transporter, permease protein 1 | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_3378 | | chromosome replication initiation inhibitor protein | 0.49 | Ac3H11_1110 | | Nucleoside ABC transporter, permease protein 1 | low | > 79 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.34 | DVU0594 | iciA | chromosome initiation inhibitor (TIGR) | 0.29 | DVU1068 | | branched-chain amino acid ABC transporter, permease protein (TIGR) | low | > 55 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.53 | Psyr_0672 | | nucleoside ABC transporter membrane protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.53 | Psyr_0672 | | nucleoside ABC transporter membrane protein | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_1782 | | Chromosome initiation inhibitor | 0.55 | PfGW456L13_8 | | Nucleoside ABC transporter, permease protein 1 | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_04995 | | LysR family transcriptional regulator | 0.53 | AO356_07980 | | sugar ABC transporter permease | low | > 104 |
| Desulfovibrio vulgaris Miyazaki F | 0.31 | DvMF_2123 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.29 | DvMF_3027 | | inner-membrane translocator (RefSeq) | low | > 51 |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_708 | | Chromosome initiation inhibitor | 0.55 | Pf1N1B4_1244 | | Nucleoside ABC transporter, permease protein 1 | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.30 | Psest_1166 | | transcriptional regulator, ArgP family | 0.45 | Psest_1391 | | ABC-type uncharacterized transport system, permease component | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_2849 | | Chromosome initiation inhibitor | 0.54 | Pf6N2E2_3468 | | Nucleoside ABC transporter, permease protein 1 | low | > 103 |
Not shown: 43 genomes with orthologs for Rru_A0658 only; 7 genomes with orthologs for Rru_A1904 only