| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2436 | | DNA-binding response regulator, LuxR family | sig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_03045 | | LuxR family transcriptional regulator | insig. | 99 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00993 | | Virulence factors putative positive transcription regulator BvgA | sig. | 99 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_251 | | DNA-binding response regulator, LuxR family | insig. | 93 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2261 | | DNA-binding response regulator, LuxR family | insig. | 92 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_19190 | | LuxR family transcriptional regulator | insig. | 93 | 100 |
| o | Pseudomonas sp. DMC3 | GFF4587 | | Virulence factors putative positive transcription regulator BvgA | insig. | 91 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS08555 | | response regulator transcription factor | insig. | 84 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08555 | | response regulator transcription factor | insig. | 84 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS05270 | | response regulator transcription factor | insig. | 83 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_08600 | | LuxR family transcriptional regulator | insig. | 82 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2114 | | two component transcriptional regulator, LuxR family | insig. | 82 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2114 | | two component transcriptional regulator, LuxR family | insig. | 82 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01852 | | Virulence factors putative positive transcription regulator BvgA | cofit | 83 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS22070 | | response regulator transcription factor | no data | 79 | 100 |
| o | Pseudomonas putida KT2440 | PP_2101 | | DNA-binding response regulator in two-component regulatory system with EvgS | strong | 78 | 100 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04095 | | LuxR family transcriptional regulator | insig. | 67 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3890 | | regulatory protein, LuxR:Response regulator receiver | insig. | 67 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3890 | | regulatory protein, LuxR:Response regulator receiver | insig. | 67 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_741 | | DNA-binding response regulator, LuxR family | insig. | 66 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5592 | | DNA-binding response regulator, LuxR family | insig. | 67 | 100 |
| | Pseudomonas sp. DMC3 | GFF5090 | | Virulence factors putative positive transcription regulator BvgA | cofit | 67 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05730 | | response regulator transcription factor | insig. | 67 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05730 | | response regulator transcription factor | insig. | 67 | 100 |
| | Pseudomonas simiae WCS417 | PS417_05645 | | LuxR family transcriptional regulator | insig. | 67 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18335 | | LuxR family transcriptional regulator | insig. | 66 | 100 |
| | Pseudomonas sp. RS175 | PFR28_03351 | | Virulence factors putative positive transcription regulator BvgA | insig. | 67 | 100 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01316 | | Virulence factors putative positive transcription regulator BvgA | insig. | 66 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS16880 | | response regulator transcription factor | insig. | 65 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS23985 | | response regulator transcription factor | insig. | 62 | 100 |
| | Pseudomonas putida KT2440 | PP_1090 | | putative Virulence factors positive transcription regulator BvgA | insig. | 62 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1751 | | DNA-binding response regulator, LuxR family | insig. | 64 | 90 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_15495 | | DNA-binding response regulator | insig. | 59 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS09855 | | response regulator transcription factor | insig. | 57 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_2705 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 56 | 100 |
| | Pseudomonas segetis P6 | MPMX49_03691 | | Virulence factors putative positive transcription regulator BvgA | insig. | 57 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20365 | | DNA-binding response regulator | insig. | 56 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS26035 | | response regulator transcription factor | insig. | 56 | 100 |
| | Pseudomonas simiae WCS417 | PS417_10655 | | LuxR family transcriptional regulator | insig. | 51 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS16270 | | response regulator transcription factor | insig. | 50 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25385 | | Putative transcriptional regulator | insig. | 53 | 100 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02223 | | Virulence factors putative positive transcription regulator BvgA | cofit | 50 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10720 | | response regulator transcription factor | insig. | 50 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10720 | | response regulator transcription factor | insig. | 50 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS25605 | | response regulator transcription factor | insig. | 49 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_130 | | DNA-binding response regulator, LuxR family | insig. | 45 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17415 | | response regulator transcription factor | insig. | 41 | 98 |
| | Pseudomonas sp. S08-1 | OH686_23325 | | hypothetical protein | insig. | 44 | 100 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19645 | | LuxR family transcriptional regulator | insig. | 45 | 100 |
| | Pseudomonas sp. RS175 | PFR28_02863 | | Virulence factors putative positive transcription regulator BvgA | insig. | 44 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_25 | | DNA-binding response regulator, LuxR family | insig. | 44 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21195 | | DNA-binding protein | insig. | 44 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS23590 | | response regulator transcription factor | no data | 43 | 100 |
| | Pseudomonas putida KT2440 | PP_3412 | | DNA-binding response regulator, LuxR family | insig. | 43 | 100 |
| | Pseudomonas sp. DMC3 | GFF763 | | Virulence factors putative positive transcription regulator BvgA | cofit | 42 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06603 | | two component transcriptional regulator, LuxR family | no data | 38 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2399 | | DNA-binding response regulator, LuxR family | insig. | 39 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_004754 | | two-component system response regulator EvgA | insig. | 38 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34075 | | chemotaxis protein CheY | insig. | 37 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34400 | | chemotaxis protein CheY | insig. | 37 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04614 | | Virulence factors putative positive transcription regulator BvgA | cofit | 41 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4454 | | Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) | insig. | 38 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33995 | | chemotaxis protein CheY | insig. | 40 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_20675 | | response regulator | insig. | 37 | 100 |
| | Escherichia coli BL21 | ECD_02279 | | response regulator in two-component regulatory system with EvgS | no data | 37 | 100 |
| | Escherichia fergusonii Becca | EFB2_01505 | | DNA-binding transcriptional activator EvgA | cofit | 37 | 100 |
| | Escherichia coli ECOR27 | NOLOHH_14110 | evgA | acid-sensing system DNA-binding response regulator EvgA | no data | 37 | 100 |
| | Escherichia coli ECRC100 | OKFHMN_22430 | evgA | acid-sensing system DNA-binding response regulator EvgA | no data | 37 | 100 |
| | Escherichia coli ECRC101 | MCAODC_12960 | evgA | acid-sensing system DNA-binding response regulator EvgA | sig. | 37 | 100 |
| | Escherichia coli ECRC102 | NIAGMN_20205 | evgA | acid-sensing system DNA-binding response regulator EvgA | insig. | 37 | 100 |
| | Escherichia coli ECRC62 | BNILDI_12965 | evgA | acid-sensing system DNA-binding response regulator EvgA | insig. | 37 | 100 |
| | Escherichia coli ECRC98 | JDDGAC_26390 | evgA | acid-sensing system DNA-binding response regulator EvgA | insig. | 37 | 100 |
| | Escherichia coli ECRC99 | KEDOAH_05795 | evgA | acid-sensing system DNA-binding response regulator EvgA | no data | 37 | 100 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01352 | | DNA-binding transcriptional activator EvgA | insig. | 37 | 100 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS13635 | | acid-sensing system DNA-binding response regulator EvgA | no data | 37 | 100 |
| | Escherichia coli BW25113 | b2369 | evgA | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | sig. | 37 | 100 |
| | Escherichia coli ECOR38 | HEPCGN_21635 | evgA | acid-sensing system DNA-binding response regulator EvgA | insig. | 37 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17430 | | response regulator transcription factor | insig. | 40 | 95 |
| o | Enterobacter sp. TBS_079 | MPMX20_01114 | | Putative transcriptional regulator | strong | 35 | 99 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01050 | | response regulator transcription factor | insig. | 34 | 100 |
| | Escherichia coli BL21 | ECD_00485 | | response regulator family protein | no data | 35 | 99 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03146 | | Virulence factors putative positive transcription regulator BvgA | insig. | 35 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2442 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 35 | 99 |
| | Escherichia coli ECOR27 | NOLOHH_00760 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | sig. | 35 | 99 |
| | Escherichia coli ECOR38 | HEPCGN_06415 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 35 | 99 |
| | Escherichia coli ECRC100 | OKFHMN_07775 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 35 | 99 |
| | Escherichia coli ECRC101 | MCAODC_26995 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 35 | 99 |
| | Escherichia coli ECRC102 | NIAGMN_05830 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 35 | 99 |
| | Escherichia coli ECRC62 | BNILDI_22195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 35 | 99 |
| | Escherichia coli ECRC98 | JDDGAC_11425 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 35 | 99 |
| | Escherichia coli ECRC99 | KEDOAH_20195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 35 | 99 |
| | Escherichia coli BW25113 | b0535 | fimZ | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 35 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05390 | | acid-sensing system DNA-binding response regulator EvgA | insig. | 35 | 100 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_04275 | | DNA-binding response regulator | cofit | 36 | 97 |
| | Erwinia tracheiphila SCR3 | LU632_RS04720 | | response regulator transcription factor | insig. | 36 | 97 |
| | Cellulophaga baltica 18 | M666_RS08335 | | response regulator transcription factor | sig. | 32 | 98 |
| | Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 35 | 100 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 35 | 100 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 100 |
| | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 100 |