| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_04625 | | Methyltransferase | insig. | 100 | 100 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS01695 | | class I SAM-dependent methyltransferase | insig. | 88 | 100 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01905 | | class I SAM-dependent methyltransferase | insig. | 88 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_1404 | | Methyltransferase domain. | sig. | 53 | 93 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_4206 | | SAM-dependent methyltransferases | insig. | 50 | 94 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_29560 | | SAM-dependent methyltransferase | insig. | 52 | 93 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13240 | | class I SAM-dependent methyltransferase | insig. | 51 | 95 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS06195 | | class I SAM-dependent methyltransferase | no data | 46 | 97 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4147 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 42 | 94 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0896 | | Nodulation protein S (NodS). | insig. | 44 | 94 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 31 | 69 |
| | Klebsiella michiganensis M5al | BWI76_RS14735 | | type 11 methyltransferase | sig. | 29 | 61 |
| | Mycobacterium tuberculosis H37Rv | Rv0560c | | Possible benzoquinone methyltransferase (methylase) | insig. | 31 | 56 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS20800 | | class I SAM-dependent methyltransferase | insig. | 26 | 71 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 28 | 68 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09535 | | ArsR family transcriptional regulator | strong | 28 | 71 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS08885 | | class I SAM-dependent methyltransferase | insig. | 37 | 57 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c36480 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 29 | 55 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 31 | 45 |
| | Pseudomonas sp. DMC3 | GFF3328 | | tRNA 5-carboxymethoxyuridine methyltransferase | insig. | 33 | 54 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 32 | 50 |
| | Xanthobacter sp. DMC5 | GFF4148 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 32 | 54 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 32 | 54 |
| | Agrobacterium fabrum C58 | Atu1625 | | methyltransferase | insig. | 31 | 67 |
| | Marinobacter adhaerens HP15 | HP15_3191 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 29 | 62 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1065 | | SAM-dependent methyltransferases | insig. | 47 | 20 |
| | Pseudomonas putida KT2440 | PP_0578 | | putative Methyltransferase | insig. | 35 | 53 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS03125 | | class I SAM-dependent methyltransferase | insig. | 33 | 56 |
| | Mycobacterium tuberculosis H37Rv | Rv0089 | | Possible methyltransferase/methylase | insig. | 33 | 55 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2579 | | transcriptional regulator, ArsR family (RefSeq) | no data | 30 | 48 |
| | Rhizobium sp. OAE497 | ABIE40_RS11955 | | metalloregulator ArsR/SmtB family transcription factor | sig. | 30 | 51 |
| | Enterobacter sp. TBS_079 | MPMX20_02727 | | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 29 | 73 |
| | Caulobacter crescentus NA1000 | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | strong | 31 | 50 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | cofit | 31 | 50 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07290 | | SAM-dependent methyltransferase | insig. | 28 | 46 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25655 | | class I SAM-dependent methyltransferase | insig. | 27 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00644 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 31 | 54 |
| | Mycobacterium tuberculosis H37Rv | Rv2675c | | Conserved hypothetical protein | insig. | 32 | 49 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_08880 | | SAM-dependent methyltransferase | insig. | 27 | 55 |
| | Mycobacterium tuberculosis H37Rv | Rv1377c | | Putative transferase | insig. | 32 | 49 |
| | Paraburkholderia graminis OAS925 | ABIE53_001332 | | sarcosine/dimethylglycine N-methyltransferase | insig. | 35 | 49 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 26 | 80 |