Homologs of HMPREF1058_RS02610 from Phocaeicola vulgatus CL09T03C04

4Fe-4S dicluster domain-containing protein
SEED: Periplasmic [Fe] hydrogenase (EC 1.12.7.2)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02610 4Fe-4S dicluster domain-containing protein strong 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS01900 4Fe-4S dicluster domain-containing protein strong 99 100
o Bacteroides ovatus ATCC 8483 BACOVA_04579 4Fe-4S binding domain protein strong 78 100
o Bacteroides thetaiotaomicron VPI-5482 BT1834 putative hydrogenase (NCBI ptt file) strong 77 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10710 monomeric [FeFe] hydrogenase insig. 69 99
  Rhodopseudomonas palustris CGA009 TX73_000690 [FeFe] hydrogenase, group A insig. 26 69
  Shewanella oneidensis MR-1 SO3920 hydA periplasmic Fe hydrogenase, large subunit (NCBI ptt file) insig. 26 59
  Shewanella sp. ANA-3 Shewana3_0711 response regulator receiver protein (RefSeq) insig. 27 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU1771 hydC [Fe] hydrogenase gamma (TIGR) insig. 28 54
  Desulfovibrio vulgaris Hildenborough JW710 DVU1769 hydA periplasmic [Fe] hydrogenase, large subunit (TIGR) insig. 27 63
  Bacteroides ovatus ATCC 8483 BACOVA_05602 hydrogenase, Fe-only sig. 28 44
  Bacteroides thetaiotaomicron VPI-5482 BT0124 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) insig. 27 44
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02350 [Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein insig. 27 41
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02515 NADH-dependent [FeFe] hydrogenase, group A6 insig. 25 53
  Rhodospirillum rubrum S1H Rru_A0310 Ferredoxin hydrogenase (NCBI) insig. 23 64
  Methanococcus maripaludis JJ MMJJ_RS06825 4Fe-4S binding protein sig. 38 20
  Methanococcus maripaludis S2 MMP_RS07535 4Fe-4S binding protein strong 37 20
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15450 Fe-S cluster domain-containing protein insig. 38 18
  Methanococcus maripaludis S2 MMP_RS07525 4Fe-4S binding protein strong 27 24
  Escherichia coli ECOR38 HEPCGN_05685 ydhY ferredoxin-like protein insig. 31 21
  Escherichia coli ECRC99 KEDOAH_00810 ydhY ferredoxin-like protein no data 31 22
  Escherichia coli BL21 ECD_01643 putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex no data 31 21
  Escherichia fergusonii Becca EFB2_02318 putative ferredoxin-like protein YdhY insig. 31 21
  Escherichia coli ECOR27 NOLOHH_17820 ydhY ferredoxin-like protein no data 31 21
  Escherichia coli ECRC100 OKFHMN_27300 ydhY ferredoxin-like protein cofit 31 21
  Escherichia coli ECRC101 MCAODC_18110 ydhY ferredoxin-like protein insig. 31 21
  Escherichia coli ECRC102 NIAGMN_00765 ydhY ferredoxin-like protein no data 31 21
  Escherichia coli ECRC98 JDDGAC_01875 ydhY ferredoxin-like protein insig. 31 21
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02050 putative ferredoxin-like protein YdhY insig. 31 21
  Escherichia coli Nissle 1917 ECOLIN_RS09365 ferredoxin-like protein no data 31 21
  Escherichia coli BW25113 b1674 ydhY predicted 4Fe-4S ferridoxin-type protein (NCBI) insig. 31 21
  Escherichia coli ECRC62 BNILDI_16610 ydhY ferredoxin-like protein cofit 31 21
  Bacteroides stercoris CC31F HMPREF1181_RS15125 Fe-S cluster domain-containing protein no data 29 24
  Methanococcus maripaludis S2 MMP_RS06405 4Fe-4S binding protein no data 32 21
  Methanococcus maripaludis S2 MMP_RS07725 4Fe-4S dicluster domain-containing protein strong 41 15
  Methanococcus maripaludis JJ MMJJ_RS07945 4Fe-4S binding protein strong 32 21
  Bacteroides thetaiotaomicron VPI-5482 BT0617 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) strong 29 20
  Methanococcus maripaludis JJ MMJJ_RS06835 4Fe-4S binding protein strong 26 21
  Ralstonia solanacearum PSI07 RPSI07_RS20480 ferredoxin insig. 43 12
  Shewanella sp. ANA-3 Shewana3_2340 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) insig. 30 19
  Methanococcus maripaludis JJ MMJJ_RS06630 4Fe-4S dicluster domain-containing protein strong 39 16
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06345 Fe-S cluster domain-containing protein strong 33 19
  Methanococcus maripaludis S2 MMP_RS04290 4Fe-4S binding protein sig. 33 19
  Escherichia coli ECOR38 HEPCGN_22970 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Bacteroides ovatus ATCC 8483 BACOVA_02236 electron transport complex, RnfABCDGE type, B subunit strong 29 20
  Phocaeicola dorei CL03T12C01 ABI39_RS20105 Fe-S cluster domain-containing protein strong 28 36
  Methanococcus maripaludis S2 MMP_RS08340 4Fe-4S binding protein strong 42 13
  Magnetospirillum magneticum AMB-1 AMB_RS13970 NADH-quinone oxidoreductase subunit I no data 39 14
  Klebsiella michiganensis M5al BWI76_RS09685 dimethylsulfoxide reductase, chain B no data 29 27
  Desulfovibrio vulgaris Hildenborough JW710 DVU2797 NADH:quinone oxidoreductase subunit RnfB (Shelley Haveman) strong 31 20
  Methanococcus maripaludis JJ MMJJ_RS06030 4Fe-4S binding protein strong 41 13
  Rahnella sp. WP5 EX31_RS19905 4Fe-4S dicluster domain-containing protein insig. 28 23
  Dinoroseobacter shibae DFL-12 Dshi_3167 ferredoxin-type protein NapF (RefSeq) insig. 30 20
  Dickeya dianthicola 67-19 HGI48_RS07350 4Fe-4S binding protein insig. 46 10
  Dickeya dianthicola ME23 DZA65_RS07860 4Fe-4S dicluster domain-containing protein insig. 46 10
  Escherichia fergusonii Becca EFB2_00234 Hydrogenase-4 component A insig. 51 9
  Escherichia coli ECOR27 NOLOHH_07850 hycB electron transporter cofit 51 9
  Escherichia coli ECOR38 HEPCGN_14795 hycB electron transporter cofit 51 9
  Escherichia coli ECRC62 BNILDI_03695 hycB electron transporter insig. 51 9
  Escherichia coli Nissle 1917 ECOLIN_RS20435 4Fe-4S binding protein insig. 51 9
  Methanococcus maripaludis JJ MMJJ_RS07945 4Fe-4S binding protein strong 31 19
  Escherichia coli Nissle 1917 ECOLIN_RS04760 dimethylsulfoxide reductase iron-sulfur subunit DmsB no data 29 27
  Escherichia coli BL21 ECD_01558 oxidoreductase, Fe-S subunit no data 28 27
  Escherichia fergusonii Becca EFB2_02403 Anaerobic dimethyl sulfoxide reductase chain B insig. 28 27
  Escherichia coli ECOR27 NOLOHH_18270 dmsB dimethylsulfoxide reductase subunit B no data 28 27
  Escherichia coli ECOR38 HEPCGN_06145 dmsB dimethylsulfoxide reductase subunit B insig. 28 27
  Escherichia coli ECRC100 OKFHMN_27765 dmsB dimethylsulfoxide reductase subunit B no data 28 27
  Escherichia coli ECRC101 MCAODC_17645 dmsB dimethylsulfoxide reductase subunit B insig. 28 27
  Escherichia coli ECRC102 NIAGMN_00310 dmsB dimethylsulfoxide reductase subunit B insig. 28 27
  Escherichia coli ECRC62 BNILDI_17060 dmsB dimethylsulfoxide reductase subunit B insig. 28 27
  Escherichia coli ECRC98 JDDGAC_02355 dmsB dimethylsulfoxide reductase subunit B cofit 28 27
  Escherichia coli ECRC99 KEDOAH_00340 dmsB dimethylsulfoxide reductase subunit B no data 28 27
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02137 Anaerobic dimethyl sulfoxide reductase chain B insig. 28 27
  Escherichia coli Nissle 1917 ECOLIN_RS08880 DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG no data 28 27
  Escherichia coli BW25113 b1589 ynfG oxidoreductase, Fe-S subunit (NCBI) insig. 28 27
  Escherichia coli ECRC100 OKFHMN_15905 hycB electron transporter cofit 51 9
  Escherichia coli ECRC101 MCAODC_06420 hycB electron transporter insig. 51 9
  Escherichia coli ECRC102 NIAGMN_13665 hycB electron transporter insig. 51 9
  Escherichia coli ECRC98 JDDGAC_19535 hycB electron transporter cofit 51 9
  Escherichia coli ECRC99 KEDOAH_12245 hycB electron transporter no data 51 9
  Paraburkholderia graminis OAS925 ABIE53_002873 dihydropyrimidine dehydrogenase (NAD+) subunit PreA insig. 35 14
  Escherichia coli BL21 ECD_03425 putative hydrogenase, 4Fe-4S ferredoxin-type component insig. 51 9
  Escherichia coli BW25113 b3573 yiaI predicted hydrogenase, 4Fe-4S ferredoxin-type component (NCBI) sig. 51 9
  Enterobacter sp. TBS_079 MPMX20_02083 Anaerobic dimethyl sulfoxide reductase chain B no data 29 27
  Escherichia coli BL21 ECD_00899 dimethyl sulfoxide reductase, anaerobic, subunit B insig. 29 27
  Escherichia coli ECOR27 NOLOHH_22110 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC100 OKFHMN_05540 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC101 MCAODC_24930 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC102 NIAGMN_03260 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC62 BNILDI_20365 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC98 JDDGAC_09350 dmsB dimethylsulfoxide reductase subunit B insig. 29 27
  Escherichia coli ECRC99 KEDOAH_22195 dmsB dimethylsulfoxide reductase subunit B no data 29 27
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02773 Anaerobic dimethyl sulfoxide reductase chain B insig. 29 27
  Escherichia coli BW25113 b0895 dmsB dimethyl sulfoxide reductase, anaerobic, subunit B (NCBI) sig. 29 27
  Desulfovibrio vulgaris Miyazaki F DvMF_2469 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) insig. 54 8
  Methanococcus maripaludis S2 MMP_RS06405 4Fe-4S binding protein no data 31 19
  Desulfovibrio vulgaris Hildenborough JW710 DVU1080 iron-sulfur cluster-binding protein (TIGR) sig. 28 17
  Enterobacter asburiae PDN3 EX28DRAFT_2037 DMSO reductase, iron-sulfur subunit cofit 30 27
  Magnetospirillum magneticum AMB-1 AMB_RS06305 4Fe-4S dicluster domain-containing protein cofit 37 10
  Escherichia fergusonii Becca EFB2_01015 Ferredoxin--NADP reductase insig. 36 14