Homologs of Psest_0650 from Pseudomonas stutzeri RCH2

RNA polymerase sigma factor, sigma-70 family
SEED: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 40 90
o Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 39 90
o Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 40 87
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 35 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 37 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 35 92
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 36 94
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 36 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 36 94
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 35 92
o Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 38 86
  Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 36 87
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 40 84
o Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 37 87
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 37 84
o Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 41 84
  Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 38 85
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 37 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 36 90
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 38 85
  Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 37 84
o Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 38 84
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 35 92
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 36 84
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 35 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 34 92
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 39 96
  Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 36 90
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 37 83
  Pseudomonas segetis P6 ACVTMO_RS15980 sigma-70 family RNA polymerase sigma factor insig. 38 91
  Pseudomonas aeruginosa MRSN321 DY961_RS18585 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 37 85
  Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS sig. 37 85
  Pseudomonas aeruginosa PUPa3 DQ20_RS59800 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 37 85
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 38 96
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 35 84
o Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 35 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 35 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 34 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 37 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 36 85
  Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 36 85
  Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 37 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 37 85
  Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 36 92
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 39 75
  Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 37 85
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 36 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 32 87
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 37 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein insig. 37 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 36 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 35 86
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 42 83
  Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 37 85
  Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 36 85
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 39 88
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 37 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 37 87
  Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 37 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 37 85
  Pseudomonas orientalis W4I3 QF045_RS21700 RNA polymerase factor sigma-70 no data 37 85
  Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 37 85
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 34 88
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 34 86
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 37 90
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 37 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 37 85
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 34 91
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 34 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 34 85
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 38 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 35 85
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 38 88
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 38 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 40 97
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 35 86
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 35 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 34 86
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 39 83
  Variovorax sp. SCN45 GFF96 RNA polymerase ECF-type sigma factor insig. 34 92
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 32 92
o Rhodopseudomonas palustris CGA009 TX73_016965 RNA polymerase sigma factor insig. 36 93
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 35 85
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 34 86
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 33 90
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 37 85
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 36 75
o Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 35 83
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 39 97
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 37 91
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 36 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 36 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 41 75
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 40 97
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 35 90
  Variovorax sp. SCN45 GFF1723 Extracytoplasmic function (ECF) sigma factor VreI no data 36 88
o Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 35 83
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 34 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 35 92