Homologs of Psest_3525 from Pseudomonas stutzeri RCH2

Formamidopyrimidine-DNA glycosylase
SEED: Endonuclease
KEGG: endonuclease VIII

62 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3525 Formamidopyrimidine-DNA glycosylase insig. 100 100
o Pseudomonas sp. S08-1 OH686_17610 Endonuclease insig. 63 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.810.1 Endonuclease insig. 60 93
  Acinetobacter baumannii LAC-4 RR41_RS03325 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 80
  Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 27 93
  Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 23 92
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 35 39
  Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 23 93
  Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 24 93
  Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 23 80
  Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 31 39
  Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 93
  Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 23 93
  Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 24 81
  Escherichia coli ECRC100 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase cofit 24 81
  Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 24 81
  Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 24 81
  Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase insig. 24 81
  Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 24 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4632 Endonuclease VIII insig. 25 93
  Klebsiella pneumoniae MKP103 KDGMDA_08015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 81
  Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 24 81
  Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 24 81
  Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 24 81
  Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 25 74
  Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 81
  Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 81
  Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 24 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 23 80
  Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 26 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 26 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 24 81
  Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 79
  Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 23 93
  Escherichia fergusonii Becca EFB2_03389 Endonuclease 8 insig. 27 62
  Escherichia coli Nissle 1917 ECOLIN_RS03820 endonuclease VIII no data 27 62
  Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 26 92
  Escherichia coli ECOR27 NOLOHH_23375 nei endonuclease VIII insig. 26 92
  Escherichia coli ECRC62 BNILDI_21370 nei endonuclease VIII insig. 26 92
  Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 24 81
  Escherichia coli ECRC100 OKFHMN_06990 nei endonuclease VIII insig. 26 62
  Escherichia coli ECRC102 NIAGMN_05045 nei endonuclease VIII cofit 26 62
  Escherichia coli ECRC98 JDDGAC_10645 nei endonuclease VIII insig. 26 62
  Escherichia coli ECRC99 KEDOAH_20975 nei endonuclease VIII no data 26 62
  Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 25 74
  Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 74
  Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 24 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 30 40
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03530 endonuclease VIII cofit 24 93
  Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 23 93
  Enterobacter sp. TBS_079 MPMX20_01348 Endonuclease 8 insig. 27 93
  Escherichia coli ECRC101 MCAODC_26210 Endonuclease 8 insig. 28 62
  Dickeya dadantii 3937 DDA3937_RS06430 endonuclease VIII insig. 25 93
  Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 26 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 29 39
  Escherichia coli ECOR38 HEPCGN_01220 nei endonuclease VIII insig. 26 62
  Methylophilus sp. DMC18 GFF1917 Formamidopyrimidine-DNA glycosylase cofit 23 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 22 93
  Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 27 39
  Pectobacterium carotovorum WPP14 HER17_RS14965 endonuclease VIII insig. 25 92
  Klebsiella michiganensis M5al BWI76_RS08380 endonuclease VIII insig. 26 93