Homologs of GFF2947 from Variovorax sp. SCN45

3'-5' exonuclease
SEED: 3'-5' exonuclease

34 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2947 3'-5' exonuclease insig. 100 100
o Variovorax sp. OAS795 ABID97_RS10205 3'-5' exonuclease insig. 90 95
o Acidovorax sp. GW101-3H11 Ac3H11_1019 3'-5' exonuclease insig. 56 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4964 3'-5' exonuclease domain protein no data 54 93
o Acinetobacter radioresistens SK82 MPMX26_02848 Ribonuclease D no data 39 93
  Pseudomonas stutzeri RCH2 Psest_2051 Ribonuclease D insig. 43 92
o Acinetobacter baumannii LAC-4 RR41_RS01340 3'-5' exonuclease domain-containing protein 2 insig. 39 93
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS13690 3'-5' exonuclease strong 31 96
  Bacteroides stercoris CC31F HMPREF1181_RS05920 3'-5' exonuclease domain-containing protein 2 sig. 31 83
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2818 Ribonuclease D sig. 32 87
  Phocaeicola dorei CL03T12C01 ABI39_RS18220 3'-5' exonuclease domain-containing protein 2 sig. 32 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05885 3'-5' exonuclease domain-containing protein 2 strong 32 83
  Shewanella oneidensis MR-1 SO1153 exonuclease, putative (NCBI ptt file) insig. 32 74
  Bacteroides ovatus ATCC 8483 BACOVA_05135 3'-5' exonuclease strong 27 83
  Bacteroides thetaiotaomicron VPI-5482 BT4332 conserved hypothetical protein (NCBI ptt file) strong 27 83
o Desulfovibrio vulgaris Miyazaki F DvMF_0883 3'-5' exonuclease (RefSeq) strong 29 87
o Desulfovibrio vulgaris Hildenborough JW710 DVU1082 3- 5 exonuclease domain protein (TIGR) strong 29 82
  Shewanella sp. ANA-3 Shewana3_0980 3'-5' exonuclease (RefSeq) insig. 31 83
  Marinobacter adhaerens HP15 HP15_1882 ribonuclease D insig. 32 50
  Rhodospirillum rubrum S1H Rru_A2073 Ribonuclease D (NCBI) no data 34 50
  Pseudomonas aeruginosa MRSN321 DY961_RS18805 rnd;go_function=RNA ribonuclease D sig. 31 62
  Pseudomonas aeruginosa PA14 IKLFDK_06140 ribonuclease D insig. 31 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS52945 rnd;go_function=RNA ribonuclease D sig. 31 62
  Rhodopseudomonas palustris CGA009 TX73_015755 ribonuclease D strong 29 49
  Pseudomonas segetis P6 ACVTMO_RS09125 rnd ribonuclease D strong 28 73
  Pseudomonas sp. S08-1 OH686_05315 ribonuclease D strong 32 50
  Pseudomonas simiae WCS417 PS417_07375 ribonuclease D sig. 29 62
  Pseudomonas fluorescens SBW25 PFLU_RS07465 ribonuclease D insig. 30 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07465 ribonuclease D strong 30 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01609 Ribonuclease D cofit 30 62
  Pseudomonas stutzeri RCH2 Psest_2995 ribonuclease D no data 30 52
  Vibrio cholerae E7946 ATCC 55056 CSW01_09900 ribonuclease D insig. 28 50
  Pseudomonas orientalis W4I3 QF045_RS10030 ribonuclease D insig. 29 60
  Shewanella amazonensis SB2B Sama_1933 ribonuclease D (RefSeq) strong 27 50