Homologs of GFF1000 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
SEED: Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
KEGG: type I restriction enzyme, S subunit

65 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1000 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 100 100
  Escherichia coli BW25113 b4348 hsdS specificity determinant for hsdM and hsdR (NCBI) sig. 51 70
  Pantoea sp. MT58 IAI47_16545 restriction endonuclease subunit S cofit 49 72
  Shewanella oneidensis MR-1 SO4264 hsdS-2 type I restriction-modification system, S subunit (NCBI ptt file) insig. 40 74
  Shewanella sp. ANA-3 Shewana3_2960 restriction modification system DNA specificity subunit (RefSeq) cofit 40 69
  Pseudomonas sp. RS175 PFR28_03898 hypothetical protein insig. 36 76
o Pseudomonas fluorescens FW300-N2E3 AO353_11440 hypothetical protein insig. 30 100
o Klebsiella michiganensis M5al BWI76_RS03370 type I restriction-modification system subunit S cofit 32 87
o Alteromonas macleodii MIT1002 MIT1002_03393 Type I restriction enzyme EcoKI specificity protein insig. 32 89
  Rhodanobacter sp. FW510-T8 OKGIIK_14000 restriction endonuclease subunit S insig. 25 89
  Bacteroides ovatus ATCC 8483 BACOVA_04168 type I restriction modification DNA specificity domain protein insig. 41 37
  Phocaeicola dorei CL03T12C01 ABI39_RS21415 restriction endonuclease subunit S insig. 41 35
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01060 restriction endonuclease subunit S insig. 26 89
  Bacteroides stercoris CC31F HMPREF1181_RS13600 restriction endonuclease subunit S insig. 36 42
  Methylophilus sp. DMC18 GFF1950 Type-1 restriction enzyme EcoKI specificity protein insig. 33 44
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3938.1 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 25 90
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08650 restriction endonuclease subunit S insig. 28 91
  Phocaeicola dorei CL03T12C01 ABI39_RS21405 restriction endonuclease subunit S insig. 22 71
  Bacteroides thetaiotaomicron VPI-5482 BT4523 Type I restriction enzyme EcoR124II specificity protein (NCBI ptt file) insig. 25 48
  Escherichia coli ECOR38 HEPCGN_10725 restriction endonuclease subunit S insig. 29 37
  Phocaeicola dorei CL03T12C01 ABI39_RS21420 restriction endonuclease subunit S insig. 22 79
  Bacteroides stercoris CC31F HMPREF1181_RS13630 restriction endonuclease subunit S insig. 22 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0381 Restriction endonuclease S subunits insig. 22 60
  Escherichia coli ECOR38 HEPCGN_09460 type I restriction endonuclease subunit S cofit 25 44
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09050 restriction endonuclease subunit S insig. 27 41
  Pseudomonas putida KT2440 PP_4742 Type I restriction-modification system, S subunit insig. 28 37
  Caulobacter crescentus NA1000 CCNA_00657 type I restriction-modification system specificity subunit insig. 24 70
  Caulobacter crescentus NA1000 Δfur CCNA_00657 type I restriction-modification system specificity subunit cofit 24 70
  Acinetobacter radioresistens SK82 MPMX26_02869 hypothetical protein strong 25 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20485 hypothetical protein cofit 24 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3107 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) strong 27 47
  Synechocystis sp000284455 PCC 6803 SGL_RS01155 restriction endonuclease subunit S sig. 23 63
  Bacteroides thetaiotaomicron VPI-5482 BT4520 Type I restriction enzyme EcoAI specificity protein (NCBI ptt file) insig. 22 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3107 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) strong 23 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00020 restriction endonuclease subunit S no data 26 40
  Pantoea sp. MT58 IAI47_16545 restriction endonuclease subunit S cofit 25 50
  Shewanella oneidensis MR-1 SO0382 hsdS-1 type I restriction-modification system, S subunit (NCBI ptt file) insig. 21 62
  Shewanella oneidensis MR-1 SO4264 hsdS-2 type I restriction-modification system, S subunit (NCBI ptt file) insig. 25 49
  Escherichia coli ECRC100 OKFHMN_05700 restriction endonuclease insig. 23 41
  Bacteroides thetaiotaomicron VPI-5482 BT4523 Type I restriction enzyme EcoR124II specificity protein (NCBI ptt file) insig. 19 70
  Shewanella sp. ANA-3 Shewana3_2960 restriction modification system DNA specificity subunit (RefSeq) cofit 26 47
  Acinetobacter radioresistens SK82 MPMX26_02869 hypothetical protein strong 21 74
  Rhodanobacter denitrificans MT42 LRK55_RS00335 restriction endonuclease subunit S cofit 24 56
  Pseudomonas putida KT2440 PP_4742 Type I restriction-modification system, S subunit insig. 25 28
  Bacteroides thetaiotaomicron VPI-5482 BT4520 Type I restriction enzyme EcoAI specificity protein (NCBI ptt file) insig. 25 41
  Methylophilus sp. DMC18 GFF1950 Type-1 restriction enzyme EcoKI specificity protein insig. 26 54
  Synechocystis sp000284455 PCC 6803 SGL_RS01815 restriction endonuclease subunit S cofit 24 49
  Alteromonas macleodii MIT1002 MIT1002_04091 EcoKI restriction-modification system protein HsdS insig. 25 43
  Rhodanobacter denitrificans MT42 LRK55_RS10120 restriction endonuclease subunit S insig. 24 40
  Xanthobacter sp. DMC5 GFF2199 hypothetical protein insig. 26 30
  Phaeobacter inhibens DSM 17395 PGA1_c30700 putative type I restriction-modification system, S subunit insig. 27 54
  Shewanella sp. ANA-3 Shewana3_3793 restriction modification system DNA specificity subunit (RefSeq) insig. 22 44
  Fusobacterium nucleatum SB010 HUW76_09000 restriction endonuclease subunit S cofit 32 31
  Escherichia coli BW25113 b4348 hsdS specificity determinant for hsdM and hsdR (NCBI) sig. 21 47
  Marinobacter adhaerens HP15 HP15_1579 type I site-specific restriction-modification system, S subunit sig. 25 56
  Pseudomonas stutzeri RCH2 Psest_3406 Restriction endonuclease S subunits sig. 23 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0381 Restriction endonuclease S subunits insig. 31 23
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4441 Restriction endonuclease S subunits insig. 26 31
  Shewanella sp. ANA-3 Shewana3_3793 restriction modification system DNA specificity subunit (RefSeq) insig. 21 69
  Cellulophaga baltica 18 M666_RS14695 restriction endonuclease subunit S insig. 25 24
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20485 hypothetical protein cofit 23 44
  Escherichia coli ECOR38 HEPCGN_09460 type I restriction endonuclease subunit S cofit 25 36
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1524.1 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 20 69
  Rhodanobacter sp. FW510-T8 OKGIIK_13430 Methylase-S domain-containing protein insig. 23 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU1705 type I restriction-modification enzyme, S subunit (TIGR) insig. 20 44