Homologs of AO353_24020 from Pseudomonas fluorescens FW300-N2E3

RNA polymerase subunit sigma
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E3 AO353_24020 RNA polymerase subunit sigma insig. 100 100
o Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 42 96
o Variovorax sp. SCN45 GFF5858 heme uptake regulator insig. 42 93
o Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 44 95
o Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 44 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 44 88
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 41 95
o Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 41 95
o Pseudomonas putida KT2440 PP_3086 putative RNA polymerase sigma-70 factor insig. 40 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 41 88
o Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 42 90
o Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 42 88
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 42 87
o Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 43 90
  Variovorax sp. SCN45 GFF2431 RNA polymerase ECF-type sigma factor insig. 40 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 42 95
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 35 92
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 38 94
o Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 41 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 39 88
o Pseudomonas fluorescens FW300-N2C3 AO356_28820 RNA polymerase subunit sigma insig. 38 88
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 38 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4818 RNA polymerase sigma-70 factor, ECF subfamily insig. 37 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 40 87
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1682 RNA polymerase sigma-70 factor, ECF subfamily insig. 37 88
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 39 87
o Pseudomonas syringae pv. syringae B728a Psyr_2580 Sigma-70 region 2 no data 37 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2580 Sigma-70 region 2 insig. 37 95
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 88
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 36 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 36 88
  Pseudomonas simiae WCS417 PS417_05100 RNA polymerase sigma factor sig. 36 88
o Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 40 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 38 87
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 40 92
o Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 37 99
o Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 37 99
o Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 37 99
  Herbaspirillum seropedicae SmR1 HSERO_RS00175 RNA polymerase sigma factor insig. 40 89
o Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI insig. 37 99
  Pseudomonas simiae WCS417 PS417_12935 RNA polymerase sigma factor insig. 37 91
o Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 35 94
  Pseudomonas fluorescens SBW25 PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 37 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 37 87
o Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 39 87
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 38 87
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 41 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 41 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 36 92
o Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 36 90
o Ralstonia solanacearum GMI1000 RS_RS21190 RNA polymerase sigma factor cofit 38 87
  Pectobacterium carotovorum WPP14 HER17_RS15360 sigma-70 family RNA polymerase sigma factor insig. 39 87
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 38 88
  Pseudomonas sp. RS175 PFR28_01871 putative RNA polymerase sigma factor FecI sig. 35 94
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 37 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6050 RNA polymerase sigma-70 factor, ECF subfamily insig. 35 90
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 39 87
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 39 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 39 87
  Pseudomonas fluorescens FW300-N2C3 AO356_26280 RNA polymerase subunit sigma insig. 36 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2474 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 87
o Paraburkholderia sabiae LMG 24235 QEN71_RS15135 sigma-70 family RNA polymerase sigma factor insig. 38 87
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 39 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 38 87
o Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 38 87
o Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 38 87
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 34 95
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 41 88
  Pseudomonas simiae WCS417 PS417_26065 RNA polymerase sigma factor insig. 39 87
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 38 88
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 39 87
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 38 87
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 35 88
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 36 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 38 87
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 94
  Pseudomonas putida KT2440 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily sig. 35 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 33 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 33 88
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 33 88
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 34 88
  Variovorax sp. SCN45 GFF723 RNA polymerase ECF-type sigma factor insig. 37 87
  Pseudomonas sp. RS175 PFR28_04775 putative RNA polymerase sigma factor FecI insig. 37 93
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 35 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 35 88
  Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 41 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 41 88
o Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 36 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4748 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 80
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1135 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 80
  Pseudomonas putida KT2440 PP_3577 RNA polymerase, sigma 19 factor insig. 32 94
  Pseudomonas putida KT2440 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily sig. 39 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_563 RNA polymerase sigma-70 factor insig. 36 87
  Dechlorosoma suillum PS Dsui_2165 RNA polymerase sigma factor, sigma-70 family no data 36 92
  Pseudomonas fluorescens FW300-N2C3 AO356_10620 RNA polymerase subunit sigma insig. 36 88
  Herbaspirillum seropedicae SmR1 HSERO_RS14150 RNA polymerase sigma factor insig. 38 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3991 RNA polymerase sigma-70 factor, ECF subfamily insig. 35 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4253 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 91