Conservation of cofitness between Xcc-8004.1710.1 and Xcc-8004.3537.1 in Xanthomonas campestris pv. campestris strain 8004

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 1.0 Xcc-8004.3537.1 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.65 9
Lysobacter sp. OAE881 0.59 ABIE51_RS16065 pyrroline-5-carboxylate reductase 0.77 ABIE51_RS07005 asparagine synthase B low > 62
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS10425 pyrroline-5-carboxylate reductase 0.72 ABZR86_RS02815 asparagine synthase B 0.88 39
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_11135 proC pyrroline-5-carboxylate reductase 0.73 OKGIIK_07005 asnB asparagine synthase B low > 52
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS04260 pyrroline-5-carboxylate reductase 0.73 LRK54_RS00305 asparagine synthase B 0.62 43
Rhodanobacter denitrificans MT42 0.45 LRK55_RS04030 pyrroline-5-carboxylate reductase 0.73 LRK55_RS18205 asparagine synthase B — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.50 GFF1173 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 90
Shewanella sp. ANA-3 0.32 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) 0.62 Shewana3_2549 asnB asparagine synthetase B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.32 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) 0.62 SO2767 asnB-1 asparagine synthetase B, glutamine-hydrolyzing (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.32 IAI46_21415 pyrroline-5-carboxylate reductase 0.58 IAI46_06065 asparagine synthase B low > 86
Dickeya dianthicola ME23 0.32 DZA65_RS18440 pyrroline-5-carboxylate reductase 0.59 DZA65_RS06685 asparagine synthase B — —
Dickeya dianthicola 67-19 0.32 HGI48_RS17350 pyrroline-5-carboxylate reductase 0.59 HGI48_RS06340 asparagine synthase B — —
Shewanella loihica PV-4 0.30 Shew_3016 pyrroline-5-carboxylate reductase (RefSeq) 0.62 Shew_1509 asnB asparagine synthetase B (RefSeq) low > 60
Rahnella sp. WP5 0.30 EX31_RS02690 pyrroline-5-carboxylate reductase 0.58 EX31_RS23245 asparagine synthase B 0.95 35
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_02450 pyrroline-5-carboxylate reductase 0.61 CSW01_05055 asparagine synthase B low > 62
Alteromonas macleodii MIT1002 0.30 MIT1002_03062 Pyrroline-5-carboxylate reductase 0.58 MIT1002_01266 Asparagine synthetase B [glutamine-hydrolyzing] 0.98 2
Shewanella amazonensis SB2B 0.30 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) 0.63 Sama_2101 asnB asparagine synthetase B (RefSeq) 0.90 46
Pectobacterium carotovorum WPP14 0.30 HER17_RS03805 pyrroline-5-carboxylate reductase 0.59 HER17_RS15120 asparagine synthase B — —
Klebsiella michiganensis M5al 0.24 BWI76_RS06170 pyrroline-5-carboxylate reductase 0.59 BWI76_RS08180 asparagine synthase B — —
Escherichia fergusonii Becca 0.24 EFB2_03670 Pyrroline-5-carboxylate reductase 0.59 EFB2_03429 Asparagine synthetase B [glutamine-hydrolyzing] low > 86
Escherichia coli Nissle 1917 0.24 ECOLIN_RS02345 pyrroline-5-carboxylate reductase 0.59 ECOLIN_RS03600 asparagine synthase B low > 55
Escherichia coli ECRC100 0.24 OKFHMN_08610 proC pyrroline-5-carboxylate reductase 0.59 OKFHMN_07180 asnB asparagine synthase B low > 80
Escherichia coli ECRC102 0.24 NIAGMN_06665 proC pyrroline-5-carboxylate reductase 0.59 NIAGMN_05235 asnB asparagine synthase B — —
Escherichia coli ECRC99 0.24 KEDOAH_19355 proC pyrroline-5-carboxylate reductase 0.59 KEDOAH_20790 asnB asparagine synthase B — —
Escherichia coli ECOR38 0.24 HEPCGN_07250 proC pyrroline-5-carboxylate reductase 0.59 HEPCGN_01050 asnB asparagine synthase B low > 87
Escherichia coli ECRC101 0.24 MCAODC_27835 proC pyrroline-5-carboxylate reductase 0.59 MCAODC_26395 asnB asparagine synthase B low > 87
Escherichia coli ECRC98 0.24 JDDGAC_12265 proC pyrroline-5-carboxylate reductase 0.59 JDDGAC_10830 asnB asparagine synthase B low > 86
Escherichia coli ECOR27 0.24 NOLOHH_01535 proC pyrroline-5-carboxylate reductase 0.59 NOLOHH_23560 asnB asparagine synthase B low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase 0.59 OHPLBJKB_03042 Asparagine synthetase B [glutamine-hydrolyzing] low > 73
Escherichia coli BW25113 0.24 b0386 proC pyrroline-5-carboxylate reductase (NCBI) 0.59 b0674 asnB asparagine synthetase B (NCBI) low > 76
Escherichia coli BL21 0.24 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding 0.59 ECD_00631 asparagine synthetase B low > 61
Escherichia coli ECRC62 0.24 BNILDI_22950 proC pyrroline-5-carboxylate reductase 0.59 BNILDI_21565 asnB asparagine synthase B low > 75
Pantoea sp. MT58 0.24 IAI47_14945 pyrroline-5-carboxylate reductase 0.60 IAI47_13900 asparagine synthase B 0.86 4
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2585 pyrroline-5-carboxylate reductase 0.59 EX28DRAFT_2301 asparagine synthase (glutamine-hydrolyzing) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.59 GFF4582 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 78
Enterobacter sp. TBS_079 0.23 MPMX20_00976 Pyrroline-5-carboxylate reductase 0.59 MPMX20_01320 Asparagine synthetase B [glutamine-hydrolyzing] low > 85
Erwinia tracheiphila SCR3 0.21 LU632_RS18995 proC pyrroline-5-carboxylate reductase 0.59 LU632_RS16265 asnB asparagine synthase B — —
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS02960 pyrroline-5-carboxylate reductase 0.59 ABI39_RS20695 asparagine synthase B low > 72
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS08830 pyrroline-5-carboxylate reductase 0.59 HMPREF1058_RS06930 asparagine synthase B low > 67
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03587 pyrroline-5-carboxylate reductase 0.58 BACOVA_03758 asparagine synthase (glutamine-hydrolyzing) low > 94
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS03440 pyrroline-5-carboxylate reductase 0.58 HMPREF1181_RS16045 asparagine synthase B low > 56
Bacteroides thetaiotaomicron VPI-5482 0.13 BT3757 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.59 BT0551 asparagine synthetase B [glutamine-hydrolyzing] (NCBI ptt file) low > 81

Not shown: 55 genomes with orthologs for Xcc-8004.1710.1 only; 3 genomes with orthologs for Xcc-8004.3537.1 only