Conservation of cofitness between Xcc-8004.1885.1 and Xcc-8004.2177.1 in Xanthomonas campestris pv. campestris strain 8004

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1885.1 TldE protein, part of TldE/TldD proteolytic complex 1.0 Xcc-8004.2177.1 Transcriptional regulator lacI family 0.64 9
Pseudomonas putida KT2440 0.47 PP_0942 regulatory protease 0.26 PP_3380 2-ketogluconate utilization repressor low > 96
Rahnella sp. WP5 0.47 EX31_RS12320 metalloprotease PmbA 0.28 EX31_RS16895 LacI family transcriptional regulator low > 89
Variovorax sp. SCN45 0.46 GFF4697 TldE protein, part of TldE/TldD proteolytic complex 0.26 GFF2137 Ribose operon repressor 0.79 94
Serratia liquefaciens MT49 0.45 IAI46_22575 metalloprotease PmbA 0.27 IAI46_25050 ribose operon transcriptional repressor RbsR low > 86
Variovorax sp. OAS795 0.45 ABID97_RS20695 metalloprotease PmbA 0.26 ABID97_RS24770 LacI family DNA-binding transcriptional regulator low > 91
Klebsiella michiganensis M5al 0.44 BWI76_RS02850 metalloprotease PmbA 0.26 BWI76_RS07435 LacI family transcriptional regulator low > 92
Pantoea sp. MT58 0.44 IAI47_02765 metalloprotease PmbA 0.27 IAI47_20330 LacI family DNA-binding transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF904 TldE protein, part of TldE/TldD proteolytic complex 0.26 GFF1704 Ribose operon repressor low > 78
Ralstonia solanacearum UW163 0.44 UW163_RS15845 metalloprotease PmbA 0.53 UW163_RS07270 LacI family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS13965 metalloprotease PmbA 0.53 RALBFv3_RS06355 LacI family transcriptional regulator low > 76
Shewanella amazonensis SB2B 0.44 Sama_0482 PmbA protein (RefSeq) 0.24 Sama_0294 LacI family transcription regulator (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS09265 peptidase C69 0.27 HSERO_RS11495 LacI family transcription regulator low > 78
Ralstonia solanacearum PSI07 0.43 RPSI07_RS19505 metalloprotease PmbA 0.55 RPSI07_RS10885 LacI family DNA-binding transcriptional regulator low > 81
Castellaniella sp019104865 MT123 0.43 ABCV34_RS10610 metalloprotease PmbA 0.20 ABCV34_RS08650 substrate-binding domain-containing protein — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS09660 metalloprotease PmbA 0.53 ABZR87_RS02035 substrate-binding domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS14750 peptidase PMbA 0.25 RR42_RS09500 dehydrogenase low > 128
Ralstonia solanacearum GMI1000 0.42 RS_RS04700 metalloprotease PmbA 0.53 RS_RS14305 LacI family DNA-binding transcriptional regulator — —
Paraburkholderia graminis OAS925 0.42 ABIE53_003116 PmbA protein 0.50 ABIE53_004210 LacI family fructose operon transcriptional repressor low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS14705 peptidase C69 0.26 BPHYT_RS11205 LacI family transcription regulator low > 109
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS04270 metalloprotease PmbA 0.26 QEN71_RS07355 LacI family DNA-binding transcriptional regulator low > 153
Azospirillum brasilense Sp245 0.32 AZOBR_RS11930 modulator protein 0.62 AZOBR_RS32320 LacI family transcriptional regulator 0.37 21
Azospirillum sp. SherDot2 0.31 MPMX19_01886 Metalloprotease PmbA 0.61 MPMX19_04627 HTH-type transcriptional regulator DegA — —
Rhodospirillum rubrum S1H 0.29 Rru_A0575 Peptidase U62, modulator of DNA gyrase (NCBI) 0.62 Rru_A1973 Transcriptional Regulator, LacI family (NCBI) low > 58
Sinorhizobium meliloti 1021 0.26 SMc00897 PMBA protein 0.31 SM_b20674 LacI family transcriptional regulator low > 103
Agrobacterium fabrum C58 0.25 Atu0693 PmbA/TldD related protein 0.28 Atu5007 santhopine-responsive transcriptional repressor low > 89
Bacteroides thetaiotaomicron VPI-5482 0.19 BT3649 putative modulator of DNA gyrase (NCBI ptt file) 0.21 BT3613 LacI family transcriptional regulator (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS03170 TldD/PmbA family protein 0.23 HMPREF1181_RS05535 LacI family DNA-binding transcriptional regulator low > 56

Not shown: 59 genomes with orthologs for Xcc-8004.1885.1 only; 3 genomes with orthologs for Xcc-8004.2177.1 only