Conservation of cofitness between Xcc-8004.4046.1 and Xcc-8004.1134.1 in Xanthomonas campestris pv. campestris strain 8004

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I 1.0 Xcc-8004.1134.1 Protein sirB1 0.66 2
Ralstonia solanacearum GMI1000 0.65 RS_RS08655 endopeptidase La 0.33 RS_RS12825 transglutaminase — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS16135 endopeptidase La 0.34 RPSI07_RS12095 transglutaminase — —
Ralstonia solanacearum UW163 0.65 UW163_RS14650 endopeptidase La 0.33 UW163_RS08420 transglutaminase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS01340 endopeptidase La 0.33 RALBFv3_RS05205 transglutaminase — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS12785 endopeptidase La 0.34 ABZR87_RS00860 SirB1 family protein low > 80
Dickeya dadantii 3937 0.64 DDA3937_RS05650 endopeptidase La 0.14 DDA3937_RS10980 tetratricopeptide repeat-containing protein low > 74
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I 0.14 PfGW456L13_4959 Protein sirB1 low > 87
Klebsiella michiganensis M5al 0.64 BWI76_RS06535 endopeptidase La 0.13 BWI76_RS17420 hypothetical protein low > 92
Pseudomonas fluorescens SBW25 0.64 PFLU_RS19160 endopeptidase La 0.14 PFLU_RS05105 tetratricopeptide repeat protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS19160 endopeptidase La 0.14 PFLU_RS05105 tetratricopeptide repeat protein low > 109
Pectobacterium carotovorum WPP14 0.64 HER17_RS15840 endopeptidase La 0.15 HER17_RS10495 invasion regulator SirB1 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.14 Psyr_1027 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.14 Psyr_1027 conserved hypothetical protein low > 86
Pantoea sp. MT58 0.64 IAI47_14645 endopeptidase La 0.13 IAI47_11255 tetratricopeptide repeat-containing protein — —
Pseudomonas sp. S08-1 0.64 OH686_03635 endopeptidase La 0.17 OH686_18730 hypothetical protein low > 80
Enterobacter sp. TBS_079 0.64 MPMX20_01030 Lon protease 0.14 MPMX20_02633 hypothetical protein low > 85
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS12905 peptidase 0.31 HSERO_RS06985 transglutaminase — —
Escherichia coli BW25113 0.64 b0439 lon DNA-binding ATP-dependent protease La (NCBI) 0.14 b1214 ychA predicted transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.64 BNILDI_22670 lon_P403L Lon protease 0.14 BNILDI_18750 sirB1 invasion regulator SirB1 low > 75
Escherichia coli BL21 0.64 ECD_00391 DNA-binding ATP-dependent protease La 0.14 ECD_01189 transglutaminase-like TPR-repeat protein low > 61
Escherichia coli Nissle 1917 0.64 ECOLIN_RS02635 endopeptidase La 0.15 ECOLIN_RS07335 invasion regulator SirB1 low > 55
Escherichia coli ECOR27 0.64 NOLOHH_01255 lon_P403L Lon protease 0.14 NOLOHH_20595 sirB1 invasion regulator SirB1 low > 75
Escherichia coli ECOR38 0.64 HEPCGN_06935 lon_P403L Lon protease 0.14 HEPCGN_24930 sirB1 invasion regulator SirB1 low > 87
Pseudomonas putida KT2440 0.64 PP_2302 DNA-binding, ATP-dependent protease 0.17 PP_4618 conserved protein of unknown function low > 96
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2531 endopeptidase La 0.14 EX28DRAFT_0833 Uncharacterized conserved protein low > 76
Escherichia fergusonii Becca 0.64 EFB2_03618 Lon protease 0.15 EFB2_02713 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03234 Lon protease 0.14 OHPLBJKB_02473 hypothetical protein low > 73
Escherichia coli ECRC101 0.63 MCAODC_27545 Lon protease 0.14 MCAODC_21795 sirB1 invasion regulator SirB1 low > 87
Escherichia coli ECRC100 0.63 OKFHMN_08320 Lon protease 0.14 OKFHMN_28465 sirB1 invasion regulator SirB1 low > 80
Escherichia coli ECRC98 0.63 JDDGAC_11975 Lon protease 0.14 JDDGAC_06110 sirB1 invasion regulator SirB1 low > 86
Escherichia coli ECRC99 0.63 KEDOAH_19645 Lon protease 0.14 KEDOAH_25460 sirB1 invasion regulator SirB1 — —
Escherichia coli ECRC102 0.63 NIAGMN_06375 Lon protease 0.14 NIAGMN_27770 sirB1 invasion regulator SirB1 — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS21975 endopeptidase La 0.33 QEN71_RS02805 SirB1 family protein low > 153
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS09460 peptidase 0.33 BPHYT_RS15895 transglutaminase — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS09030 DNA-binding protein 0.31 RR42_RS17195 transglutaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 0.33 H281DRAFT_04115 Regulator of sirC expression, contains transglutaminase-like and TPR domains — —
Azospirillum sp. SherDot2 0.62 MPMX19_01545 Lon protease 0.17 MPMX19_02473 hypothetical protein low > 112
Acidovorax sp. GW101-3H11 0.62 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.26 Ac3H11_1327 Protein sirB1 low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.30 GFF3424 Protein sirB1 low > 90
Variovorax sp. OAS795 0.61 ABID97_RS17590 endopeptidase La 0.30 ABID97_RS08655 tetratricopeptide repeat protein low > 91
Paraburkholderia graminis OAS925 0.61 ABIE53_002117 ATP-dependent Lon protease 0.33 ABIE53_003350 regulator of sirC expression with transglutaminase-like and TPR domain low > 113
Magnetospirillum magneticum AMB-1 0.60 AMB_RS14035 endopeptidase La 0.11 AMB_RS22795 hypothetical protein low > 64
Variovorax sp. SCN45 0.60 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.29 GFF3931 Protein sirB1 low > 127
Caulobacter crescentus NA1000 0.60 CCNA_02037 ATP-dependent endopeptidase Lon 0.19 CCNA_00141 tetratricopeptide repeat family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02037 ATP-dependent endopeptidase Lon 0.19 CCNA_00141 tetratricopeptide repeat family protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS06460 endopeptidase La 0.14 A4249_RS13310 transglutaminase family protein — —

Not shown: 51 genomes with orthologs for Xcc-8004.4046.1 only; 0 genomes with orthologs for Xcc-8004.1134.1 only