Conservation of cofitness between TX73_008175 and TX73_015515 in Rhodopseudomonas palustris CGA009

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_008175 glutamate racemase 1.0 TX73_015515 LysR family transcriptional regulator 0.52 12
Bosea sp. OAE506 0.46 ABIE41_RS13570 glutamate racemase 0.58 ABIE41_RS20745 LysR family transcriptional regulator low > 77
Rhizobium sp. OAE497 0.46 ABIE40_RS10265 glutamate racemase 0.62 ABIE40_RS29265 LysR family transcriptional regulator low > 107
Serratia liquefaciens MT49 0.34 IAI46_24445 glutamate racemase 0.18 IAI46_03090 transcriptional activator NhaR — —
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_00800 glutamate racemase 0.41 CSW01_07930 LysR family transcriptional regulator — —
Shewanella sp. ANA-3 0.33 Shewana3_0180 glutamate racemase (RefSeq) 0.17 Shewana3_3036 nhaR transcriptional activator NhaR (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF2353 Glutamate racemase (EC 5.1.1.3) 0.18 GFF1120 Transcriptional activator NhaR — —
Klebsiella michiganensis M5al 0.32 BWI76_RS00895 glutamate racemase 0.18 BWI76_RS04320 transcriptional activator NhaR — —
Escherichia coli ECRC62 0.32 BNILDI_05855 murI glutamate racemase 0.18 BNILDI_08250 nhaR transcriptional activator NhaR — —
Escherichia coli ECOR27 0.32 NOLOHH_05670 murI glutamate racemase 0.18 NOLOHH_03355 nhaR transcriptional activator NhaR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_04083 Glutamate racemase 0.18 OHPLBJKB_03641 Transcriptional activator protein NhaR — —
Escherichia fergusonii Becca 0.31 EFB2_04643 Glutamate racemase 0.18 EFB2_04023 Transcriptional activator protein NhaR — —
Escherichia coli ECRC100 0.31 OKFHMN_13525 murI glutamate racemase 0.18 OKFHMN_11025 nhaR transcriptional activator NhaR — —
Escherichia coli ECOR38 0.31 HEPCGN_12180 murI glutamate racemase 0.18 HEPCGN_09010 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC98 0.31 JDDGAC_17150 murI glutamate racemase 0.18 JDDGAC_14620 nhaR transcriptional activator NhaR — —
Shewanella loihica PV-4 0.31 Shew_0139 glutamate racemase (RefSeq) 0.18 Shew_1044 nhaR transcriptional activator NhaR (RefSeq) — —
Escherichia coli ECRC102 0.31 NIAGMN_11275 murI glutamate racemase 0.18 NIAGMN_08875 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC99 0.31 KEDOAH_14635 murI glutamate racemase 0.18 KEDOAH_17130 nhaR transcriptional activator NhaR — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS22910 glutamate racemase 0.18 ECOLIN_RS00110 transcriptional activator NhaR — —
Escherichia coli ECRC101 0.31 MCAODC_04025 murI glutamate racemase 0.18 MCAODC_01540 nhaR transcriptional activator NhaR — —
Escherichia coli BW25113 0.31 b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) 0.18 b0020 nhaR DNA-binding transcriptional activator (NCBI) — —
Escherichia coli BL21 0.31 ECD_03852 glutamate racemase 0.18 ECD_00019 transcriptional activator of nhaA — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_4430 glutamate racemase (EC 5.1.1.3) 0.17 EX28DRAFT_3629 Transcriptional regulator — —
Enterobacter sp. TBS_079 0.30 MPMX20_04513 Glutamate racemase 0.18 MPMX20_00723 Transcriptional activator protein NhaR — —
Shewanella amazonensis SB2B 0.29 Sama_0194 glutamate racemase (RefSeq) 0.19 Sama_0870 nhaR transcriptional activator NhaR (RefSeq) — —
Marinobacter adhaerens HP15 0.28 HP15_803 glutamate racemase 0.44 HP15_1621 transcriptional regulator, LysR family protein — —
Dechlorosoma suillum PS 0.23 Dsui_1998 glutamate racemase 0.25 Dsui_1151 transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0952 glutamate racemase 0.23 Psyr_2422 transcriptional regulator, LysR family — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1585 Glutamate racemase (EC 5.1.1.3) 0.22 PfGW456L13_2543 Transcriptional regulator, LysR family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0952 glutamate racemase 0.23 Psyr_2422 transcriptional regulator, LysR family — —
Pseudomonas sp. RS175 0.22 PFR28_03652 Glutamate racemase 2 0.21 PFR28_01216 Transcriptional activator protein NhaR — —
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_2922 Glutamate racemase (EC 5.1.1.3) 0.22 Pf1N1B4_3936 Transcriptional regulator, LysR family — —
Pseudomonas putida KT2440 0.22 PP_0736 Glutamate racemase 0.23 PP_2444 Transcriptional regulator, LysR family — —
Pseudomonas simiae WCS417 0.21 PS417_03620 glutamate racemase 0.24 PS417_10445 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5224 Glutamate racemase (EC 5.1.1.3) 0.21 Pf6N2E2_2228 Transcriptional regulator, LysR family — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS03670 glutamate racemase 0.24 PFLU_RS10530 transcriptional activator NhaR — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_14800 glutamate racemase 0.23 AO353_20115 LysR family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS03670 glutamate racemase 0.24 PFLU_RS10530 transcriptional activator NhaR — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF4098 Glutamate racemase (EC 5.1.1.3) 0.21 GFF1910 Cys regulon transcriptional activator CysB low > 90
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_16510 glutamate racemase 0.21 AO356_01805 LysR family transcriptional regulator — —
Acidovorax sp. GW101-3H11 0.20 Ac3H11_940 Glutamate racemase (EC 5.1.1.3) 0.26 Ac3H11_815 Transcriptional regulator, LysR family — —

Not shown: 26 genomes with orthologs for TX73_008175 only; 16 genomes with orthologs for TX73_015515 only