Conservation of cofitness between TX73_019115 and TX73_008175 in Rhodopseudomonas palustris CGA009

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019115 ABC transporter permease 1.0 TX73_008175 glutamate racemase 0.49 17
Bosea sp. OAE506 0.68 ABIE41_RS23970 ABC transporter permease 0.46 ABIE41_RS13570 glutamate racemase low > 77
Rhizobium sp. OAE497 0.61 ABIE40_RS00625 ABC transporter permease 0.46 ABIE40_RS10265 glutamate racemase low > 107
Agrobacterium fabrum C58 0.59 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.45 Atu1867 glutamate racemase low > 89
Sinorhizobium meliloti 1021 0.59 SMc02830 ABC transporter permease 0.48 SMc00483 glutamate racemase — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.21 Pf6N2E2_5224 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_24455 ABC transporter permease 0.21 AO356_16510 glutamate racemase — —
Pseudomonas putida KT2440 0.58 PP_4149 putative inner membrane ABC transporter permease protein 0.22 PP_0736 Glutamate racemase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.22 Psyr_0952 glutamate racemase — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.22 Psyr_0952 glutamate racemase — —
Azospirillum sp. SherDot2 0.58 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.11 MPMX19_01787 Glutamate racemase — —
Pseudomonas sp. RS175 0.58 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.22 PFR28_03652 Glutamate racemase 2 — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.22 PfGW456L13_1585 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.22 Pf1N1B4_2922 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS12885 ABC transporter permease 0.21 PFLU_RS03670 glutamate racemase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS12885 ABC transporter permease 0.21 PFLU_RS03670 glutamate racemase — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_23465 ABC transporter permease 0.21 AO353_14800 glutamate racemase — —
Pseudomonas sp. S08-1 0.57 OH686_03610 ABC transporter, permease protein 2 0.22 OH686_07895 glutamate racemase — —
Pseudomonas stutzeri RCH2 0.57 Psest_2065 ABC-type uncharacterized transport system, permease component 0.21 Psest_1116 glutamate racemase — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_17175 ABC transporter permease 0.34 CSW01_00800 glutamate racemase — —
Pseudomonas simiae WCS417 0.56 PS417_12195 ABC transporter permease 0.21 PS417_03620 glutamate racemase — —
Marinobacter adhaerens HP15 0.56 HP15_1809 peptide ABC transporter, permease protein 0.28 HP15_803 glutamate racemase — —
Escherichia coli BL21 0.54 ECD_02109 microcin C ABC transporter permease 0.31 ECD_03852 glutamate racemase — —
Escherichia fergusonii Becca 0.54 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.31 EFB2_04643 Glutamate racemase — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS12740 ABC transporter permease 0.31 ECOLIN_RS22910 glutamate racemase — —
Escherichia coli BW25113 0.54 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.31 b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) — —
Escherichia coli ECOR38 0.54 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.31 HEPCGN_12180 murI glutamate racemase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.33 GFF2353 Glutamate racemase (EC 5.1.1.3) — —
Escherichia coli ECOR27 0.54 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.32 NOLOHH_05670 murI glutamate racemase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.32 OHPLBJKB_04083 Glutamate racemase — —
Escherichia coli ECRC62 0.54 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.32 BNILDI_05855 murI glutamate racemase — —
Escherichia coli ECRC102 0.54 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.31 NIAGMN_11275 murI glutamate racemase — —
Escherichia coli ECRC99 0.54 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.31 KEDOAH_14635 murI glutamate racemase — —
Escherichia coli ECRC100 0.54 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.31 OKFHMN_13525 murI glutamate racemase — —
Escherichia coli ECRC101 0.54 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.31 MCAODC_04025 murI glutamate racemase — —
Escherichia coli ECRC98 0.54 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.31 JDDGAC_17150 murI glutamate racemase — —
Magnetospirillum magneticum AMB-1 0.54 AMB_RS22190 ABC transporter permease 0.18 AMB_RS17835 glutamate racemase — —
Klebsiella michiganensis M5al 0.53 BWI76_RS19790 putative binding-protein-dependent transporter 0.32 BWI76_RS00895 glutamate racemase — —
Serratia liquefaciens MT49 0.53 IAI46_17325 ABC transporter permease subunit 0.34 IAI46_24445 glutamate racemase — —
Erwinia tracheiphila SCR3 0.52 LU632_RS17575 microcin C ABC transporter permease 0.33 LU632_RS19545 murI glutamate racemase — —
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.30 EX28DRAFT_4430 glutamate racemase (EC 5.1.1.3) — —
Enterobacter sp. TBS_079 0.50 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.30 MPMX20_04513 Glutamate racemase — —
Variovorax sp. SCN45 0.45 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.22 GFF484 Glutamate racemase (EC 5.1.1.3) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4337 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.21 GFF4098 Glutamate racemase (EC 5.1.1.3) 0.52 85
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS10690 ABC transporter permease 0.21 ABZR87_RS14380 glutamate racemase low > 80
Ralstonia solanacearum GMI1000 0.43 RS_RS05860 ABC transporter permease 0.21 RS_RS09835 glutamate racemase low > 80
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18330 ABC transporter permease 0.21 RPSI07_RS14860 glutamate racemase low > 81
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2909 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.20 Ac3H11_940 Glutamate racemase (EC 5.1.1.3) — —
Variovorax sp. OAS795 0.41 ABID97_RS16510 ABC transporter permease 0.23 ABID97_RS17555 glutamate racemase — —

Not shown: 19 genomes with orthologs for TX73_019115 only; 18 genomes with orthologs for TX73_008175 only