Conservation of cofitness between TX73_001525 and TX73_003225 in Rhodopseudomonas palustris CGA009

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_001525 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 1.0 TX73_003225 tRNA pseudouridine(38-40) synthase TruA 0.51 9
Bosea sp. OAE506 0.42 ABIE41_RS04690 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.56 ABIE41_RS00165 tRNA pseudouridine(38-40) synthase TruA — —
Agrobacterium fabrum C58 0.32 Atu2830 glucose inhibited division protein 0.57 Atu0368 tRNA pseudouridine synthase I — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS01815 16S rRNA methyltransferase 0.59 AZOBR_RS03570 tRNA pseudouridine synthase A — —
Sinorhizobium meliloti 1021 0.32 SMc02799 16S rRNA methyltransferase GidB 0.60 SMc01099 tRNA pseudouridine synthase A low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS19210 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.61 ABIE40_RS01915 tRNA pseudouridine(38-40) synthase TruA low > 107
Azospirillum sp. SherDot2 0.31 MPMX19_02570 Ribosomal RNA small subunit methyltransferase G 0.58 MPMX19_02005 tRNA pseudouridine synthase A — —
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00015 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.58 AMB_RS01225 tRNA pseudouridine(38-40) synthase TruA low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS13710 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 A4249_RS12340 tRNA pseudouridine(38-40) synthase TruA low > 48
Caulobacter crescentus NA1000 0.29 CCNA_03870 methyltransferase GidB 0.57 CCNA_00280 tRNA pseudouridine synthase A low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03870 methyltransferase GidB 0.57 CCNA_00280 tRNA pseudouridine synthase A 0.63 33
Dinoroseobacter shibae DFL-12 0.29 Dshi_3456 methyltransferase GidB (RefSeq) 0.48 Dshi_1938 tRNA pseudouridine synthase A (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35090 ribosomal RNA small subunit methyltransferase G 0.47 PGA1_c05650 tRNA pseudouridine synthase A low > 62
Rhodospirillum rubrum S1H 0.27 Rru_A3626 Glucose inhibited division protein (NCBI) 0.57 Rru_A3352 Pseudouridylate synthase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_2206 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 Ga0059261_0647 tRNA pseudouridine(38-40) synthase low > 68
Ralstonia solanacearum PSI07 0.18 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.34 RPSI07_RS14720 tRNA pseudouridine(38-40) synthase TruA low > 81
Ralstonia solanacearum GMI1000 0.17 RS_RS16670 ribosomal RNA small subunit methyltransferase G 0.36 RS_RS09975 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.36 RALBFv3_RS02595 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum UW163 0.16 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.36 UW163_RS11130 tRNA pseudouridine(38-40) synthase TruA — —
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU1250 gidB methyltransferase GidB (TIGR) 0.26 DVU0911 truA tRNA pseudouridine synthase A (TIGR) low > 55
Escherichia coli ECOR38 0.15 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 HEPCGN_21875 truA aspartate-semialdehyde dehydrogenase low > 87
Pseudomonas sp. S08-1 0.15 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.32 OH686_04450 tRNA pseudouridine(38-40) synthase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.29 Xcc-8004.1961.1 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.42 17
Pseudomonas sp. RS175 0.15 PFR28_04586 Ribosomal RNA small subunit methyltransferase G 0.32 PFR28_02817 tRNA pseudouridine synthase A low > 88
Escherichia coli BL21 0.14 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.35 ECD_02243 tRNA pseudouridine(38-40) synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.35 OHPLBJKB_01387 tRNA pseudouridine synthase A low > 73
Escherichia coli BW25113 0.14 b3740 gidB glucose-inhibited division protein B (NCBI) 0.35 b2318 truA tRNA pseudouridine synthase A (NCBI) low > 76
Escherichia fergusonii Becca 0.14 EFB2_04893 Ribosomal RNA small subunit methyltransferase G 0.34 EFB2_01540 tRNA pseudouridine synthase A low > 86
Escherichia coli Nissle 1917 0.14 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 ECOLIN_RS13435 tRNA pseudouridine(38-40) synthase TruA low > 55
Escherichia coli ECRC62 0.14 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 BNILDI_13225 truA tRNA pseudouridine(38-40) synthase TruA low > 75
Escherichia coli ECRC98 0.14 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 JDDGAC_26630 truA aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.14 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 NIAGMN_20445 truA aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.14 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 MCAODC_13710 truA aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC99 0.14 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 KEDOAH_05525 truA aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.14 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 OKFHMN_22670 truA aspartate-semialdehyde dehydrogenase low > 80
Escherichia coli ECOR27 0.14 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 NOLOHH_14305 truA tRNA pseudouridine(38-40) synthase TruA low > 75
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS13020 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.25 CA265_RS15580 tRNA pseudouridine(38-40) synthase TruA low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.31 Psyr_1662 tRNA pseudouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.31 Psyr_1662 tRNA pseudouridine synthase low > 86
Marinobacter adhaerens HP15 0.13 HP15_3689 glucose-inhibited division protein B 0.34 HP15_1829 tRNA pseudouridine synthase A low > 73
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.31 PfGW456L13_3941 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.54 2
Enterobacter asburiae PDN3 0.13 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.35 EX28DRAFT_0286 tRNA pseudouridine(38-40) synthase low > 76
Pseudomonas stutzeri RCH2 0.13 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.29 Psest_2585 pseudouridylate synthase I low > 67

Not shown: 0 genomes with orthologs for TX73_001525 only; 58 genomes with orthologs for TX73_003225 only