Conservation of cofitness between TX73_016660 and TX73_002655 in Rhodopseudomonas palustris CGA009

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_016660 DegQ family serine endoprotease 1.0 TX73_002655 DNA mismatch repair protein MutS 0.70 5
Bosea sp. OAE506 0.53 ABIE41_RS14685 Do family serine endopeptidase 0.55 ABIE41_RS03650 DNA mismatch repair protein MutS — —
Agrobacterium fabrum C58 0.50 Atu1915 htrA family protein 0.58 Atu0345 DNA mismatch repair protein, MutS family low > 89
Rhizobium sp. OAE497 0.50 ABIE40_RS08040 DegQ family serine endoprotease 0.57 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Sinorhizobium meliloti 1021 0.47 SMc01280 protease 0.55 SMc01125 DNA mismatch repair protein MutS low > 103
Magnetospirillum magneticum AMB-1 0.47 AMB_RS17615 PDZ domain-containing protein 0.47 AMB_RS01455 DNA mismatch repair protein MutS low > 64
Rhodospirillum rubrum S1H 0.42 Rru_A2662 Peptidase S1C, Do (NCBI) 0.50 Rru_A3541 MutS 1 protein (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS07900 Do family serine endopeptidase 0.44 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01341 DegP/HtrA-family serine protease 0.45 CCNA_00012 DNA mismatch repair protein MutS low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01341 DegP/HtrA-family serine protease 0.45 CCNA_00012 DNA mismatch repair protein MutS low > 66
Phaeobacter inhibens DSM 17395 0.36 PGA1_c01920 protease DegQ 0.49 PGA1_c35000 DNA mismatch repair protein MutS low > 62
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS17545 DegQ family serine endoprotease 0.32 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Shewanella oneidensis MR-1 0.30 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) 0.32 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) — —
Shewanella sp. ANA-3 0.30 Shewana3_0690 peptidase Do (RefSeq) 0.33 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_00150 Periplasmic serine endoprotease DegP-like 0.31 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Shewanella amazonensis SB2B 0.29 Sama_3073 serine protease (RefSeq) 0.32 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.38 35
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_03020 serine endoprotease DegQ 0.33 CSW01_02840 DNA mismatch repair protein MutS low > 62
Rhodanobacter denitrificans MT42 0.29 LRK55_RS06175 Do family serine endopeptidase 0.31 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS06430 Do family serine endopeptidase 0.31 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF2974 Outer membrane stress sensor protease DegQ, serine protease 0.31 GFF4773 DNA mismatch repair protein MutS low > 78
Escherichia coli ECRC102 0.29 NIAGMN_15565 degQ serine endoprotease DegQ 0.31 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC99 0.29 KEDOAH_10345 degQ serine endoprotease DegQ 0.31 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC101 0.29 MCAODC_08325 degQ serine endoprotease DegQ 0.31 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC98 0.29 JDDGAC_21430 degQ serine endoprotease DegQ 0.31 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC100 0.29 OKFHMN_17805 degQ serine endoprotease DegQ 0.31 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli BW25113 0.28 b3234 degQ serine endoprotease, periplasmic (NCBI) 0.31 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.28 HER17_RS19985 serine endoprotease DegQ 0.32 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC62 0.28 BNILDI_01930 degQ serine endoprotease DegQ 0.31 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECOR27 0.28 NOLOHH_09605 degQ serine endoprotease DegQ 0.31 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli BL21 0.28 ECD_03094 serine endoprotease, periplasmic 0.31 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00470 Periplasmic pH-dependent serine endoprotease DegQ 0.31 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Escherichia coli ECOR38 0.28 HEPCGN_16675 degQ serine endoprotease DegQ 0.31 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Alteromonas macleodii MIT1002 0.28 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor 0.33 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Escherichia coli Nissle 1917 0.28 ECOLIN_RS18545 serine endoprotease DegQ 0.31 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Serratia liquefaciens MT49 0.28 IAI46_03585 serine endoprotease DegP 0.31 IAI46_03800 DNA mismatch repair protein MutS low > 86
Escherichia fergusonii Becca 0.28 EFB2_00596 Periplasmic pH-dependent serine endoprotease DegQ 0.31 EFB2_01179 DNA mismatch repair protein MutS low > 86
Dickeya dianthicola 67-19 0.28 HGI48_RS01520 serine endoprotease DegQ 0.31 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Shewanella loihica PV-4 0.28 Shew_3296 protease Do (RefSeq) 0.33 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Dickeya dadantii 3937 0.28 DDA3937_RS01605 serine endoprotease DegQ 0.32 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Dickeya dianthicola ME23 0.28 DZA65_RS01585 serine endoprotease DegQ 0.31 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Rahnella sp. WP5 0.28 EX31_RS12475 Do family serine endopeptidase 0.30 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4948.1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.31 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Erwinia tracheiphila SCR3 0.27 LU632_RS21355 Do family serine endopeptidase 0.31 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Pantoea sp. MT58 0.27 IAI47_17260 serine endoprotease DegQ 0.32 IAI47_04240 DNA mismatch repair protein MutS low > 76

Not shown: 0 genomes with orthologs for TX73_016660 only; 56 genomes with orthologs for TX73_002655 only