Conservation of cofitness between SMa2355 and SMc04057 in Sinorhizobium meliloti 1021

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMa2355 DNA polymerase IV 1.0 SMc04057 hypothetical protein 0.30 19
Rhizobium sp. OAE497 0.67 ABIE40_RS27830 DNA polymerase IV 0.79 ABIE40_RS16460 circularly permuted type 2 ATP-grasp protein low > 107
Agrobacterium fabrum C58 0.66 Atu5469 DNA polymerase IV 0.81 Atu3866 hypothetical protein low > 89
Ralstonia solanacearum UW163 0.39 UW163_RS15040 DNA polymerase IV 0.25 UW163_RS20285 hypothetical protein — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS01730 DNA polymerase IV 0.25 RALBFv3_RS18845 hypothetical protein low > 76
Ralstonia solanacearum PSI07 0.39 RPSI07_RS15755 DNA polymerase IV 0.24 RPSI07_RS04735 hypothetical protein low > 81
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS13550 DNA polymerase IV 0.24 ABZR87_RS21310 circularly permuted type 2 ATP-grasp protein low > 80
Pseudomonas sp. S08-1 0.37 OH686_18925 DNA polymerase IV 0.29 OH686_15965 Protein containing domains DUF404, DUF407, DUF403 low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_1397 DNA-directed DNA polymerase 0.28 Psyr_0589 protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_1397 DNA-directed DNA polymerase 0.28 Psyr_0589 protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 low > 86
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2974 DNA polymerase IV (EC 2.7.7.7) 0.29 Pf6N2E2_3593 Protein containing domains DUF404, DUF407, DUF403 low > 103
Pseudomonas simiae WCS417 0.36 PS417_22830 DNA polymerase IV 0.29 PS417_02610 hypothetical protein low > 88
Pseudomonas sp. RS175 0.36 PFR28_00492 DNA polymerase IV 0.29 PFR28_05141 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS24490 DNA polymerase IV 0.29 PFLU_RS02680 circularly permuted type 2 ATP-grasp protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS24490 DNA polymerase IV 0.29 PFLU_RS02680 circularly permuted type 2 ATP-grasp protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_3165 DNA polymerase IV (EC 2.7.7.7) 0.30 Pf1N1B4_1392 Protein containing domains DUF404, DUF407, DUF403 low > 87
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_05570 DNA polymerase IV 0.29 AO356_08555 molybdopterin oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_16910 DNA polymerase IV 0.30 AO353_13285 molybdopterin oxidoreductase low > 101
Marinobacter adhaerens HP15 0.32 HP15_737 DNA polymerase IV 0.28 HP15_3591 protein containing DUF404, bacteria N-terminal / DUF403, bacteria / DUF407 low > 73
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS21635 DNA-directed DNA polymerase 0.24 HSERO_RS03205 hypothetical protein low > 78
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS01275 DNA-directed DNA polymerase 0.26 BPHYT_RS21895 hypothetical protein low > 109
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS08990 DNA polymerase 0.24 RR42_RS00540 hypothetical protein low > 128
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS08870 DNA polymerase IV 0.25 QEN71_RS18285 circularly permuted type 2 ATP-grasp protein low > 153
Dechlorosoma suillum PS 0.26 Dsui_2075 nucleotidyltransferase/DNA polymerase involved in DNA repair 0.29 Dsui_3230 hypothetical protein — —
Variovorax sp. OAS795 0.26 ABID97_RS07995 DNA polymerase IV 0.27 ABID97_RS20000 circularly permuted type 2 ATP-grasp protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF728 DNA polymerase IV (EC 2.7.7.7) 0.27 GFF5554 Protein containing domains DUF404, DUF407, DUF403 low > 90
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1600 DNA polymerase IV (EC 2.7.7.7) 0.27 Ac3H11_3843 Protein containing domains DUF404, DUF407, DUF403 low > 79
Variovorax sp. SCN45 0.24 GFF5999 DNA polymerase IV (EC 2.7.7.7) 0.27 GFF2687 Protein containing domains DUF404, DUF407, DUF403 low > 127
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_01439 DNA polymerase-4 0.27 H281DRAFT_03091 Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily low > 103
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_3438 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.32 Ga0059261_2464 Uncharacterized conserved protein low > 68

Not shown: 56 genomes with orthologs for SMa2355 only; 9 genomes with orthologs for SMc04057 only