Conservation of cofitness between RR42_RS01920 and RR42_RS16280 in Cupriavidus basilensis FW507-4G11

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS01920 protoheme IX farnesyltransferase 1.0 RR42_RS16280 transcriptional regulator 0.50 20
Ralstonia solanacearum PSI07 0.83 RPSI07_RS22315 protoheme IX farnesyltransferase 0.86 RPSI07_RS12765 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.82 RS_RS01830 protoheme IX farnesyltransferase 0.86 RS_RS12180 CysB family HTH-type transcriptional regulator low > 80
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS06845 heme o synthase 0.88 ABZR87_RS00220 CysB family HTH-type transcriptional regulator low > 80
Ralstonia solanacearum UW163 0.81 UW163_RS02590 protoheme IX farnesyltransferase 0.86 UW163_RS09060 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS10990 protoheme IX farnesyltransferase 0.86 RALBFv3_RS04610 CysB family HTH-type transcriptional regulator low > 76
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS01545 heme o synthase 0.78 QEN71_RS25260 CysB family HTH-type transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_01985 protoheme IX farnesyltransferase 0.79 H281DRAFT_00113 transcriptional regulator, LysR family low > 103
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS02690 protoheme IX farnesyltransferase 0.79 BPHYT_RS04720 transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.70 ABIE53_000683 protoheme IX farnesyltransferase 0.78 ABIE53_001225 LysR family cys regulon transcriptional activator low > 113
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS20745 protoheme IX farnesyltransferase 0.77 HSERO_RS15540 cys regulon transcription regulator protein — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_3883 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.58 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI — —
Variovorax sp. SCN45 0.59 GFF2307 Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB 0.59 GFF244 Cys regulon transcriptional activator CysB low > 127
Variovorax sp. OAS795 0.59 ABID97_RS23915 heme o synthase 0.59 ABID97_RS16600 CysB family HTH-type transcriptional regulator low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF698 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.60 GFF4305 Alkanesulfonate utilization operon LysR-family regulator CbI — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS13230 heme o synthase 0.55 ABCV34_RS08230 CysB family HTH-type transcriptional regulator low > 48
Methylophilus sp. DMC18 0.57 GFF2630 Protoheme IX farnesyltransferase 0.51 GFF1021 HTH-type transcriptional regulator SsuR low > 43
Rhodanobacter sp000427505 FW510-R12 0.46 LRK53_RS01315 heme o synthase 0.32 LRK53_RS09195 LysR substrate-binding domain-containing protein low > 60
Rhodanobacter denitrificans MT42 0.45 LRK55_RS06825 heme o synthase 0.33 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS07085 heme o synthase 0.33 LRK54_RS00915 LysR substrate-binding domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_16555 cyoE heme o synthase 0.33 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Shewanella sp. ANA-3 0.43 Shewana3_3998 protoheme IX farnesyltransferase (RefSeq) 0.46 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.43 SO4614 ctaB protoheme IX farnesyltransferase (NCBI ptt file) 0.45 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.4836.1 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.26 Xcc-8004.1249.1 Transcriptional regulator low > 74
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0671 protoheme IX farnesyltransferase 0.36 B158DRAFT_2455 Transcriptional regulator low > 40
Shewanella loihica PV-4 0.41 Shew_0117 protoheme IX farnesyltransferase (RefSeq) 0.43 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella amazonensis SB2B 0.38 Sama_3491 protoheme IX farnesyltransferase (RefSeq) 0.45 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —

Not shown: 71 genomes with orthologs for RR42_RS01920 only; 1 genomes with orthologs for RR42_RS16280 only