Conservation of cofitness between Psyr_2435 and Psyr_5044 in Pseudomonas syringae pv. syringae B728a

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2435 Xylulokinase 1.0 Psyr_5044 Aldose 1-epimerase 0.37 15
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2435 Xylulokinase 1.00 Psyr_5044 Aldose 1-epimerase low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_25905 xylulose kinase 0.69 AO353_09920 aldose epimerase low > 101
Pseudomonas sp. DMC3 0.73 GFF2900 Xylulose kinase 0.63 GFF482 Putative glucose-6-phosphate 1-epimerase low > 89
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4845 Xylulose kinase (EC 2.7.1.17) 0.69 Pf1N1B4_2031 Aldose 1-epimerase 0.36 63
Pseudomonas sp. RS175 0.72 PFR28_01708 Xylulose kinase 0.66 PFR28_04492 Putative glucose-6-phosphate 1-epimerase 0.24 19
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_3037 Xylulose kinase (EC 2.7.1.17) 0.68 PfGW456L13_750 Aldose 1-epimerase low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_27695 Xylulose kinase (EC 2.7.1.17) (from data) 0.66 AO356_11060 aldose epimerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_805 Xylulose kinase (EC 2.7.1.17) (from data) 0.66 Pf6N2E2_4078 Aldose 1-epimerase low > 103
Pseudomonas simiae WCS417 0.70 PS417_12690 xylulose kinase 0.60 PS417_28100 glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS13380 xylulokinase 0.58 PFLU_RS29785 D-hexose-6-phosphate mutarotase low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS13380 xylulokinase 0.58 PFLU_RS29785 D-hexose-6-phosphate mutarotase low > 109
Pseudomonas aeruginosa PA14 0.57 IKLFDK_11475 xylulokinase 0.50 IKLFDK_26315 D-hexose-6-phosphate mutarotase low > 101
Lysobacter sp. OAE881 0.43 ABIE51_RS03610 xylulokinase 0.16 ABIE51_RS13360 D-hexose-6-phosphate mutarotase low > 62
Klebsiella michiganensis M5al 0.26 BWI76_RS19340 xylulokinase 0.23 BWI76_RS11500 D-hexose-6-phosphate mutarotase low > 92
Serratia liquefaciens MT49 0.24 IAI46_00275 xylulokinase 0.28 IAI46_14360 D-hexose-6-phosphate mutarotase low > 86
Pectobacterium carotovorum WPP14 0.24 HER17_RS21090 xylulokinase 0.23 HER17_RS11135 D-hexose-6-phosphate mutarotase low > 75
Pantoea sp. MT58 0.24 IAI47_19265 xylulokinase 0.25 IAI47_08940 D-hexose-6-phosphate mutarotase low > 76
Variovorax sp. SCN45 0.22 GFF5281 Xylulose kinase (EC 2.7.1.17) 0.18 GFF5356 Aldose 1-epimerase low > 127
Variovorax sp. OAS795 0.22 ABID97_RS07155 xylulokinase 0.18 ABID97_RS23110 D-hexose-6-phosphate mutarotase low > 91
Dickeya dadantii 3937 0.22 DDA3937_RS20940 xylulokinase 0.25 DDA3937_RS10260 D-hexose-6-phosphate mutarotase low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS00305 xylulokinase 0.25 HGI48_RS10270 D-hexose-6-phosphate mutarotase low > 71
Rahnella sp. WP5 0.22 EX31_RS09770 xylulokinase 0.26 EX31_RS06275 D-hexose-6-phosphate mutarotase low > 89
Escherichia coli ECRC101 0.21 MCAODC_06475 xylB xylulokinase 0.22 MCAODC_18685 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC98 0.21 JDDGAC_19590 xylB xylulokinase 0.22 JDDGAC_01300 yeaD Putative glucose-6-phosphate 1-epimerase low > 86
Escherichia coli ECRC102 0.21 NIAGMN_13720 xylB xylulokinase 0.22 NIAGMN_01340 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC99 0.21 KEDOAH_12190 xylB xylulokinase 0.22 KEDOAH_01385 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC100 0.21 OKFHMN_15960 xylB xylulokinase 0.22 OKFHMN_26725 yeaD Putative glucose-6-phosphate 1-epimerase low > 80
Dickeya dianthicola ME23 0.21 DZA65_RS00300 xylulokinase 0.25 DZA65_RS10745 D-hexose-6-phosphate mutarotase low > 75
Escherichia coli ECRC62 0.21 BNILDI_03640 xylB xylulokinase 0.23 BNILDI_16040 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia coli BL21 0.21 ECD_03416 xylulokinase 0.23 ECD_01749 D-hexose-6-phosphate epimerase-like protein low > 61
Escherichia coli ECOR38 0.21 HEPCGN_14845 xylB xylulokinase 0.22 HEPCGN_05115 yeaD Putative glucose-6-phosphate 1-epimerase low > 87
Escherichia fergusonii Becca 0.21 EFB2_00243 Xylulose kinase 0.23 EFB2_02214 Putative glucose-6-phosphate 1-epimerase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_00140 Xylulose kinase 0.23 OHPLBJKB_01952 Putative glucose-6-phosphate 1-epimerase low > 73
Escherichia coli ECOR27 0.21 NOLOHH_07905 xylB xylulokinase 0.23 NOLOHH_17255 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia coli BW25113 0.21 b3564 xylB xylulokinase (NCBI) 0.23 b1780 yeaD orf, hypothetical protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.21 ECOLIN_RS20385 xylulokinase 0.23 ECOLIN_RS09925 D-hexose-6-phosphate mutarotase — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS02220 xylulokinase 0.46 HSERO_RS07395 aldose 1-epimerase low > 78
Enterobacter asburiae PDN3 0.21 EX28DRAFT_3829 D-xylulose kinase 0.20 EX28DRAFT_1774 Uncharacterized enzymes related to aldose 1-epimerase low > 76
Enterobacter sp. TBS_079 0.21 MPMX20_00166 Xylulose kinase 0.20 MPMX20_01843 Putative glucose-6-phosphate 1-epimerase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF445 Xylulose kinase (EC 2.7.1.17) 0.21 GFF3477 Aldose 1-epimerase family protein YeaD low > 78
Pseudomonas sp. S08-1 0.15 OH686_21820 Glycerol kinase 0.56 OH686_13395 Aldose 1-epimerase family protein YeaD low > 80
Erwinia tracheiphila SCR3 0.14 LU632_RS04265 carbohydrate kinase 0.21 LU632_RS13000 D-hexose-6-phosphate mutarotase low > 74
Shewanella loihica PV-4 0.12 Shew_1608 carbohydrate kinase, FGGY (RefSeq) 0.27 Shew_2165 aldose 1-epimerase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.11 Sama_1976 carbohydrate kinase, FGGY (RefSeq) 0.26 Sama_2115 hypothetical protein (RefSeq) low > 62
Synechococcus elongatus PCC 7942 0.07 Synpcc7942_2462 xylB probable sugar kinase 0.15 Synpcc7942_0846 hypothetical protein low > 38

Not shown: 30 genomes with orthologs for Psyr_2435 only; 13 genomes with orthologs for Psyr_5044 only