Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4775 | | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region | 1.0 | Psyr_4380 | | translation initiation factor 1 (eIF-1/SUI1) | 0.24 | 16 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4775 | | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region | 1.00 | Psyr_4380 | | translation initiation factor 1 (eIF-1/SUI1) | low | > 86 |
Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_07675 | | ferredoxin | 0.88 | AO353_13715 | | translation initiation factor Sui1 | low | > 101 |
Pseudomonas simiae WCS417 | 0.91 | PS417_26215 | | ferredoxin | 0.90 | PS417_03000 | | translation initiation factor Sui1 | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS27860 | | glycine-betaine demethylase subunit GbcB | 0.90 | PFLU_RS03075 | | translation initiation factor Sui1 | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS27860 | | glycine-betaine demethylase subunit GbcB | 0.90 | PFLU_RS03075 | | translation initiation factor Sui1 | low | > 109 |
Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_4714 | | GbcB Glycine betaine demethylase subunit B | 0.88 | Pf6N2E2_3505 | | Translation initiation factor SUI1-related protein | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_13950 | | ferredoxin | 0.88 | AO356_08160 | | translation initiation factor Sui1 | low | > 104 |
Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_2448 | | GbcB Glycine betaine demethylase subunit B | 0.86 | Pf1N1B4_1297 | | Translation initiation factor SUI1-related protein | — | — |
Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_1112 | | GbcB Glycine betaine demethylase subunit B | 0.85 | PfGW456L13_44 | | Translation initiation factor SUI1-related protein | low | > 87 |
Pseudomonas sp. RS175 | 0.89 | PFR28_04139 | | 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component | 0.88 | PFR28_05227 | | putative protein YciH | low | > 88 |
Pseudomonas putida KT2440 | 0.87 | PP_0316 | | putative glycine-betaine dioxygenase subunit | 0.83 | PP_0566 | | translation-related factor | low | > 96 |
Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS08350 | | hybrid-cluster NAD(P)-dependent oxidoreductase | 0.46 | QEN71_RS36285 | | translation initiation factor Sui1 | low | > 153 |
Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS25220 | | ferredoxin oxidoreductase | 0.49 | BPHYT_RS28140 | | translation initiation factor SUI1 | low | > 109 |
Shewanella loihica PV-4 | 0.38 | Shew_1070 | | oxidoreductase FAD-binding subunit (RefSeq) | 0.35 | Shew_1145 | | translation initiation factor Sui1 (RefSeq) | low | > 60 |
Shewanella sp. ANA-3 | 0.34 | Shewana3_3010 | | oxidoreductase FAD-binding subunit (RefSeq) | 0.35 | Shewana3_1201 | | translation initiation factor Sui1 (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.31 | SO1364 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.35 | SO3345 | | translation initiation factor, putative (NCBI ptt file) | low | > 76 |
Shewanella amazonensis SB2B | 0.31 | Sama_0896 | | iron-sulfur cluster-binding protein (RefSeq) | 0.37 | Sama_2471 | | translation initiation factor Sui1 (RefSeq) | low | > 62 |
Rahnella sp. WP5 | 0.22 | EX31_RS18595 | | NADH oxidoreductase | 0.36 | EX31_RS09850 | | stress response translation initiation inhibitor YciH | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.20 | Echvi_0363 | | Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 | 0.31 | Echvi_2463 | | Translation initiation factor 1 (eIF-1/SUI1) and related proteins | low | > 79 |
Serratia liquefaciens MT49 | 0.20 | IAI46_08470 | | NADH oxidoreductase | 0.36 | IAI46_13910 | | stress response translation initiation inhibitor YciH | low | > 86 |
Cupriavidus basilensis FW507-4G11 | 0.19 | RR42_RS31980 | | 3-ketosteroid-9-alpha-hydroxylase | 0.45 | RR42_RS22170 | | translation initiation factor SUI1 | — | — |
Dickeya dianthicola ME23 | 0.19 | DZA65_RS09860 | | NADH oxidoreductase | 0.34 | DZA65_RS13025 | | stress response translation initiation inhibitor YciH | low | > 75 |
Dickeya dadantii 3937 | 0.19 | DDA3937_RS09535 | | NADH oxidoreductase | 0.34 | DDA3937_RS12520 | | stress response translation initiation inhibitor YciH | low | > 74 |
Dickeya dianthicola 67-19 | 0.19 | HGI48_RS09550 | | NADH oxidoreductase | 0.34 | HGI48_RS12575 | | stress response translation initiation inhibitor YciH | low | > 71 |
Escherichia coli BL21 | 0.18 | ECD_00877 | | HCP oxidoreductase, NADH-dependent | 0.35 | ECD_01259 | | initiation factor function partial mimic, SUI1 family | — | — |
Escherichia coli Nissle 1917 | 0.18 | ECOLIN_RS04640 | | NADH oxidoreductase | 0.35 | ECOLIN_RS07735 | | stress response translation initiation inhibitor YciH | — | — |
Escherichia fergusonii Becca | 0.18 | EFB2_03189 | | NADH oxidoreductase HCR | 0.35 | EFB2_02643 | | putative protein YciH | low | > 86 |
Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS12430 | | NADH oxidoreductase | 0.37 | HER17_RS09395 | | stress response translation initiation inhibitor YciH | low | > 75 |
Escherichia coli ECOR27 | 0.18 | NOLOHH_22235 | hcr | NADH oxidoreductase | 0.35 | NOLOHH_20210 | yciH | stress response translation initiation inhibitor YciH | low | > 75 |
Escherichia coli ECOR38 | 0.18 | HEPCGN_02175 | hcr | NADH oxidoreductase | 0.35 | HEPCGN_25655 | yciH | stress response translation initiation inhibitor YciH | — | — |
Enterobacter asburiae PDN3 | 0.18 | EX28DRAFT_2060 | | Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 | 0.36 | EX28DRAFT_0955 | | translation initation factor SUI1, putative, prokaryotic | — | — |
Escherichia coli BW25113 | 0.18 | b0872 | hcr | HCP oxidoreductase, NADH-dependent (NCBI) | 0.35 | b1282 | yciH | orf, hypothetical protein (VIMSS) | low | > 76 |
Escherichia coli ECRC62 | 0.18 | BNILDI_20490 | hcr | NADH oxidoreductase | 0.35 | BNILDI_18360 | yciH | stress response translation initiation inhibitor YciH | low | > 75 |
Escherichia coli ECRC100 | 0.18 | OKFHMN_05840 | hcr | NADH oxidoreductase | 0.34 | OKFHMN_02545 | yciH | stress response translation initiation inhibitor YciH | — | — |
Escherichia coli ECRC102 | 0.18 | NIAGMN_03880 | hcr | NADH oxidoreductase | 0.34 | NIAGMN_26715 | yciH | stress response translation initiation inhibitor YciH | — | — |
Escherichia coli ECRC101 | 0.18 | MCAODC_25055 | hcr | NADH oxidoreductase | 0.34 | MCAODC_15720 | yciH | stress response translation initiation inhibitor YciH | low | > 87 |
Escherichia coli ECRC98 | 0.18 | JDDGAC_09475 | hcr | NADH oxidoreductase | 0.34 | JDDGAC_05090 | yciH | stress response translation initiation inhibitor YciH | — | — |
Escherichia coli ECRC99 | 0.18 | KEDOAH_22070 | hcr | NADH oxidoreductase | 0.34 | KEDOAH_26220 | yciH | stress response translation initiation inhibitor YciH | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.18 | OHPLBJKB_02796 | | NADH oxidoreductase HCR | 0.35 | OHPLBJKB_02400 | | putative protein YciH | low | > 73 |
Enterobacter sp. TBS_079 | 0.18 | MPMX20_01534 | | NADH oxidoreductase HCR | 0.35 | MPMX20_02493 | | putative protein YciH | low | > 85 |
Klebsiella michiganensis M5al | 0.18 | BWI76_RS09565 | | hybrid-cluster NAD(P)-dependent oxidoreductase | 0.36 | BWI76_RS11970 | | stress response translation initiation inhibitor YciH | low | > 92 |
Pseudomonas sp. S08-1 | 0.18 | OH686_04175 | | Flavodoxin (ferredoxin-NADPH reductases) family 1 | 0.79 | OH686_07550 | | Translation initiation factor SUI1-related protein | low | > 80 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF4910 | | NADH oxidoreductase hcr (EC 1.-.-.-) | 0.34 | GFF2703 | | Translation initiation factor SUI1-related protein | low | > 78 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS20745 | | ferredoxin--NADP reductase | 0.31 | ABZR88_RS17210 | | translation initiation factor | — | — |
Variovorax sp. SCN45 | 0.15 | GFF7351 | | 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) | 0.48 | GFF5017 | | Translation initiation factor SUI1-related protein | low | > 127 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF1689 | | Phenylacetate-CoA oxygenase/reductase, PaaK subunit | 0.52 | GFF4936 | | Translation initiation factor SUI1-related protein | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.14 | CA265_RS25075 | | phenylacetic acid degradation protein | 0.31 | CA265_RS22355 | | translation initiation factor | low | > 88 |
Variovorax sp. OAS795 | 0.14 | ABID97_RS22805 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.45 | ABID97_RS04125 | | translation initiation factor Sui1 | low | > 91 |
Not shown: 19 genomes with orthologs for Psyr_4775 only; 11 genomes with orthologs for Psyr_4380 only