Conservation of cofitness between Psyr_4834 and Psyr_4340 in Pseudomonas syringae pv. syringae B728a

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4834 histidine:proton symporter, AAT family 1.0 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.31 15
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4834 histidine:proton symporter, AAT family 1.00 Psyr_4340 phosphomethylpyrimidine kinase, putative low > 86
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01810 amino acid permease 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01810 amino acid permease 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas simiae WCS417 0.84 PS417_01755 proline-specific permease 0.87 PS417_24600 hydrogenase low > 88
Pseudomonas putida KT2440 0.83 PP_5031 proline (histidine) APC transporter 0.84 PP_4782 Phosphomethylpyrimidine kinase low > 96
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1580 Histidine transport protein (permease) 0.78 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_318 Histidine transport protein (permease) 0.86 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_12275 histidine permease (from data) 0.86 AO353_06350 hydrogenase low > 101
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS14635 proline-specific permease 0.17 RR42_RS01370 phosphomethylpyrimidine kinase — —
Serratia liquefaciens MT49 0.72 IAI46_03655 amino acid permease 0.23 IAI46_19100 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 86
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09765 amino acid permease 0.23 ABZR87_RS04830 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Klebsiella michiganensis M5al 0.66 BWI76_RS08745 proline-specific permease 0.22 BWI76_RS19375 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 92
Pantoea sp. MT58 0.65 IAI47_14830 proline-specific permease ProY 0.19 IAI47_06810 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS05835 proline-specific permease ProY 0.22 DZA65_RS16235 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS05510 proline-specific permease ProY 0.22 HGI48_RS15410 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 71
Rahnella sp. WP5 0.64 EX31_RS22070 proline-specific permease ProY 0.22 EX31_RS20390 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 89
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.21 EX28DRAFT_0469 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4300 Proline-specific permease proY 0.22 GFF3834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 78
Enterobacter sp. TBS_079 0.61 MPMX20_00989 Proline-specific permease ProY 0.21 MPMX20_03076 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS16015 proline-specific permease ProY 0.25 HER17_RS06265 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS05450 proline-specific permease ProY 0.22 DDA3937_RS15335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Escherichia coli ECRC100 0.59 OKFHMN_08530 proY proline-specific permease ProY 0.23 OKFHMN_24075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 80
Escherichia fergusonii Becca 0.59 EFB2_03655 Proline-specific permease ProY 0.23 EFB2_01754 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 86
Escherichia coli Nissle 1917 0.59 ECOLIN_RS02425 proline-specific permease ProY 0.23 ECOLIN_RS12335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECOR38 0.59 HEPCGN_07170 proY proline-specific permease ProY 0.23 HEPCGN_02760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 87
Escherichia coli BW25113 0.59 b0402 proY predicted cryptic proline transporter (NCBI) 0.23 b2103 thiD phosphomethylpyrimidine kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03274 Proline-specific permease ProY 0.23 OHPLBJKB_01607 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 73
Escherichia coli ECRC102 0.59 NIAGMN_06585 proY proline-specific permease ProY 0.23 NIAGMN_22020 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC99 0.59 KEDOAH_19435 proY proline-specific permease ProY 0.23 KEDOAH_04075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECOR27 0.59 NOLOHH_01460 proY proline-specific permease ProY 0.23 NOLOHH_15415 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Escherichia coli ECRC62 0.59 BNILDI_22875 proY proline-specific permease ProY 0.23 BNILDI_14330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Escherichia coli ECRC101 0.59 MCAODC_27755 proY proline-specific permease ProY 0.23 MCAODC_21085 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 87
Escherichia coli ECRC98 0.59 JDDGAC_12185 proY proline-specific permease ProY 0.23 JDDGAC_28185 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 86
Escherichia coli BL21 0.59 ECD_00350 proline-specific permease 0.23 ECD_02031 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase low > 61
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS05185 amino acid permease 0.21 ABZR86_RS00760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Erwinia tracheiphila SCR3 0.56 LU632_RS18885 proY proline-specific permease ProY 0.21 LU632_RS08590 thiD bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Pseudomonas sp. RS175 0.55 PFR28_03490 Proline-specific permease ProY 0.83 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17670 L-alanine and D-alanine permease (from data) 0.86 AO356_15435 hydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.77 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 103
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09870 Amino acid permease 0.20 OKGIIK_03835 Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 52
Ralstonia solanacearum UW163 0.43 UW163_RS22065 amino acid permease 0.24 UW163_RS03675 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS20930 amino acid permease 0.24 RALBFv3_RS09905 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.23 Xcc-8004.3091.1 hypothetical protein low > 74
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1577 L-glutamine and L-histidine transporter (from data) 0.20 Ga0059261_1961 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —

Not shown: 2 genomes with orthologs for Psyr_4834 only; 49 genomes with orthologs for Psyr_4340 only