Conservation of cofitness between Psyr_1547 and Psyr_4208 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1547 glycine cleavage system transcriptional repressor 1.0 Psyr_4208 heme catalase/peroxidase 0.40 2
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1547 glycine cleavage system transcriptional repressor 1.00 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_04535 glycine cleavage system protein R 0.82 AO356_07735 hydroperoxidase low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_17665 glycine cleavage system protein R 0.78 AO353_23210 hydroperoxidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3331 Glycine cleavage system transcriptional antiactivator GcvR 0.79 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2748 Glycine cleavage system transcriptional antiactivator GcvR 0.82 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas stutzeri RCH2 0.86 Psest_1514 Glycine cleavage system regulatory protein 0.61 Psest_2741 catalase/peroxidase HPI low > 67
Pseudomonas putida KT2440 0.81 PP_1236 putative Glycine cleavage system transcriptional repressor 0.78 PP_3668 Catalase-peroxidase low > 96
Pseudomonas sp. S08-1 0.80 OH686_19210 Glycine cleavage system transcriptional antiactivator GcvR 0.61 OH686_15490 catalase/peroxidase HPI low > 80
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00780 glycine cleavage system protein R 0.74 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3086.1 Glycine cleavage system transcriptional antiactivator GcvR 0.71 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) — —
Lysobacter sp. OAE881 0.28 ABIE51_RS07990 glycine cleavage system protein R 0.69 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Shewanella loihica PV-4 0.15 Shew_1847 amino acid-binding ACT domain-containing protein (RefSeq) 0.53 Shew_0709 catalase/peroxidase HPI (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_10760 glycine cleavage system transcriptional regulator 0.60 CSW01_07835 catalase-peroxidase 0.78 32
Enterobacter asburiae PDN3 0.15 EX28DRAFT_0181 Glycine cleavage system regulatory protein 0.57 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Rahnella sp. WP5 0.14 EX31_RS22735 glycine cleavage system transcriptional repressor 0.57 EX31_RS11140 catalase/peroxidase HPI low > 89
Escherichia coli Nissle 1917 0.14 ECOLIN_RS14150 glycine cleavage system transcriptional repressor 0.58 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia coli BW25113 0.14 b2479 gcvR transcriptional regulation of gcv operon (VIMSS) 0.58 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli ECRC99 0.14 KEDOAH_06310 gcvR glycine cleavage system transcriptional repressor 0.58 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECRC101 0.14 MCAODC_12440 gcvR glycine cleavage system transcriptional repressor 0.58 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC62 0.14 BNILDI_12380 gcvR glycine cleavage system transcriptional repressor 0.58 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_01250 Glycine cleavage system transcriptional repressor 0.58 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli ECRC98 0.14 JDDGAC_25855 gcvR glycine cleavage system transcriptional repressor 0.58 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli ECRC102 0.14 NIAGMN_19680 gcvR glycine cleavage system transcriptional repressor 0.58 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia fergusonii Becca 0.14 EFB2_01407 Glycine cleavage system transcriptional repressor 0.58 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECOR38 0.14 HEPCGN_21080 gcvR glycine cleavage system transcriptional repressor 0.58 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC100 0.14 OKFHMN_21910 gcvR glycine cleavage system transcriptional repressor 0.58 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli BL21 0.14 ECD_02371 transcriptional repressor, regulatory protein accessory to GcvA 0.58 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia coli ECOR27 0.14 NOLOHH_13570 gcvR glycine cleavage system transcriptional repressor 0.58 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Enterobacter sp. TBS_079 0.14 MPMX20_03341 Glycine cleavage system transcriptional repressor 0.57 MPMX20_04528 Catalase-peroxidase low > 85
Erwinia tracheiphila SCR3 0.14 LU632_RS08320 glycine cleavage system transcriptional repressor 0.57 LU632_RS19500 katG catalase/peroxidase HPI — —
Shewanella amazonensis SB2B 0.14 Sama_1909 glycine cleavage system transcriptional repressor, putative (RefSeq) 0.61 Sama_0745 catalase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.14 SO1878 glycine cleavage system transcriptional repressor, putative (NCBI ptt file) 0.59 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_1655 glycine cleavage system transcriptional repressor, putative (RefSeq) 0.60 Shewana3_3549 catalase/peroxidase HPI (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF2179 Glycine cleavage system transcriptional antiactivator GcvR 0.58 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78

Not shown: 7 genomes with orthologs for Psyr_1547 only; 40 genomes with orthologs for Psyr_4208 only