Conservation of cofitness between Psyr_4088 and Psyr_3238 in Pseudomonas syringae pv. syringae B728a

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_3238 3-oxoacid CoA-transferase 0.34 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_3238 3-oxoacid CoA-transferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.91 AO353_27940 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.93 Pf1N1B4_5834 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.92 Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) low > 103
Pseudomonas simiae WCS417 0.68 PS417_22515 2-dehydropantoate 2-reductase 0.91 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase low > 88
Pseudomonas sp. RS175 0.68 PFR28_03426 2-dehydropantoate 2-reductase 0.93 PFR28_01324 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17955 2-dehydropantoate 2-reductase 0.92 AO356_21645 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.91 PFLU_RS10580 CoA transferase subunit B low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.91 PFLU_RS10580 CoA transferase subunit B low > 109
Pseudomonas putida KT2440 0.65 PP_1351 putative 2-dehydropantoate 2-reductase 0.92 PP_3123 acetoacetyl CoA-transferase (subunit B) low > 96
Pseudomonas stutzeri RCH2 0.57 Psest_1140 2-dehydropantoate 2-reductase 0.59 Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) low > 67
Shewanella sp. ANA-3 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.82 Shewana3_1666 butyryl-CoA:acetate CoA transferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.83 SO1891 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.85 MPMX20_01911 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.44 IAI46_16160 CoA transferase subunit B low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.86 EX28DRAFT_1709 3-oxoacid CoA-transferase, B subunit low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.45 BWI76_RS16140 3-oxoadipate CoA-transferase low > 92
Alteromonas macleodii MIT1002 0.21 MIT1002_01217 2-dehydropantoate 2-reductase 0.79 MIT1002_02000 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 70
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.83 Shew_2576 3-oxoacid CoA-transferase, B subunit (RefSeq) low > 60
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.47 ECOLIN_RS12975 acetate CoA-transferase subunit beta low > 55
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.47 HEPCGN_22420 atoA acetate CoA-transferase subunit beta low > 87
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.47 b2222 atoA acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.47 OHPLBJKB_01488 Acetate CoA-transferase subunit beta low > 73
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.47 EFB2_01633 Acetate CoA-transferase subunit beta low > 86
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.86 BNILDI_17480 atoA succinyl-CoA--3-ketoacid-CoA transferase low > 75
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.85 NOLOHH_18995 succinyl-CoA--3-ketoacid-CoA transferase — —
Escherichia coli BL21 0.20 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.47 ECD_02149 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit low > 61
Shewanella amazonensis SB2B 0.18 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.84 Sama_1356 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data) — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.56 ABZR87_RS13765 CoA transferase subunit B — —
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS05755 2-dehydropantoate 2-reductase 0.54 HSERO_RS23185 succinyl-CoA:3-ketoacid-CoA transferase low > 78
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.59 RR42_RS06560 succinyl-CoA:3-ketoacid-CoA transferase — —

Not shown: 17 genomes with orthologs for Psyr_4088 only; 37 genomes with orthologs for Psyr_3238 only