Conservation of cofitness between Psyr_4088 and Psyr_3237 in Pseudomonas syringae pv. syringae B728a

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_3237 3-oxoacid CoA-transferase 0.35 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_3237 3-oxoacid CoA-transferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.82 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.80 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.82 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) low > 103
Pseudomonas simiae WCS417 0.68 PS417_22515 2-dehydropantoate 2-reductase 0.82 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase
Pseudomonas sp. RS175 0.68 PFR28_03426 2-dehydropantoate 2-reductase 0.82 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17955 2-dehydropantoate 2-reductase 0.82 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.82 PFLU_RS10585 CoA transferase subunit A low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.82 PFLU_RS10585 CoA transferase subunit A low > 109
Pseudomonas putida KT2440 0.65 PP_1351 putative 2-dehydropantoate 2-reductase 0.84 PP_3122 acetoacetyl CoA-transferase (subunit A) low > 96
Pseudomonas stutzeri RCH2 0.57 Psest_1140 2-dehydropantoate 2-reductase 0.60 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) low > 67
Shewanella oneidensis MR-1 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.76 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.76 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq)
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.83 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.38 IAI46_16155 3-oxoacid CoA-transferase subunit A low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.82 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.42 BWI76_RS16145 3-oxoadipate CoA-transferase
Alteromonas macleodii MIT1002 0.21 MIT1002_01217 2-dehydropantoate 2-reductase 0.82 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 70
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.76 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq)
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.36 ECOLIN_RS12970 acetate CoA-transferase subunit alpha
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.36 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha low > 87
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.37 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) low > 76
Escherichia coli BL21 0.20 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.37 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit low > 61
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.36 EFB2_01634 Acetate CoA-transferase subunit alpha low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.37 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha low > 73
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.82 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase low > 75
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.82 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase low > 75
Shewanella amazonensis SB2B 0.18 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.74 Sama_0518 3-oxoacid CoA-transferase (RefSeq)
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.57 ABZR87_RS13770 CoA transferase subunit A low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS05755 2-dehydropantoate 2-reductase 0.56 HSERO_RS23190 succinyl-CoA:3-ketoacid-CoA transferase
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.62 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) low > 128

Not shown: 17 genomes with orthologs for Psyr_4088 only; 35 genomes with orthologs for Psyr_3237 only