Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4088 | | ketopantoate reductase | 1.0 | Psyr_3237 | | 3-oxoacid CoA-transferase | 0.35 | 9 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4088 | | ketopantoate reductase | 1.00 | Psyr_3237 | | 3-oxoacid CoA-transferase | low | > 86 |
Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_03645 | | 2-dehydropantoate 2-reductase | 0.82 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.69 | Pf1N1B4_651 | | 2-dehydropantoate 2-reductase (EC 1.1.1.169) | 0.80 | Pf1N1B4_5833 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 87 |
Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_5521 | | 2-dehydropantoate 2-reductase (EC 1.1.1.169) | 0.82 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | low | > 103 |
Pseudomonas simiae WCS417 | 0.68 | PS417_22515 | | 2-dehydropantoate 2-reductase | 0.82 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
Pseudomonas sp. RS175 | 0.68 | PFR28_03426 | | 2-dehydropantoate 2-reductase | 0.82 | PFR28_01325 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_17955 | | 2-dehydropantoate 2-reductase | 0.82 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 104 |
Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS24155 | | putative 2-dehydropantoate 2-reductase | 0.82 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS24155 | | putative 2-dehydropantoate 2-reductase | 0.82 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
Pseudomonas putida KT2440 | 0.65 | PP_1351 | | putative 2-dehydropantoate 2-reductase | 0.84 | PP_3122 | | acetoacetyl CoA-transferase (subunit A) | low | > 96 |
Pseudomonas stutzeri RCH2 | 0.57 | Psest_1140 | | 2-dehydropantoate 2-reductase | 0.60 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | low | > 67 |
Shewanella oneidensis MR-1 | 0.23 | SO3817 | panE | 2-dehydropantoate 2-reductase (NCBI ptt file) | 0.76 | SO1892 | atoD | acetate CoA-transferase, subunit A (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.23 | Shewana3_0780 | | 2-dehydropantoate 2-reductase (RefSeq) | 0.76 | Shewana3_1667 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
Enterobacter sp. TBS_079 | 0.22 | MPMX20_01016 | | 2-dehydropantoate 2-reductase | 0.83 | MPMX20_01912 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 85 |
Serratia liquefaciens MT49 | 0.22 | IAI46_04950 | | 2-dehydropantoate 2-reductase | 0.38 | IAI46_16155 | | 3-oxoacid CoA-transferase subunit A | low | > 86 |
Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_2546 | | 2-dehydropantoate 2-reductase | 0.82 | EX28DRAFT_1708 | | 3-oxoacid CoA-transferase, A subunit | low | > 76 |
Klebsiella michiganensis M5al | 0.21 | BWI76_RS06405 | | 2-dehydropantoate 2-reductase | 0.42 | BWI76_RS16145 | | 3-oxoadipate CoA-transferase | — | — |
Alteromonas macleodii MIT1002 | 0.21 | MIT1002_01217 | | 2-dehydropantoate 2-reductase | 0.82 | MIT1002_02001 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 70 |
Shewanella loihica PV-4 | 0.21 | Shew_2895 | | 2-dehydropantoate 2-reductase (RefSeq) | 0.76 | Shew_2575 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS02560 | | 2-dehydropantoate 2-reductase | 0.36 | ECOLIN_RS12970 | | acetate CoA-transferase subunit alpha | — | — |
Escherichia coli ECOR38 | 0.20 | HEPCGN_07025 | panE | 2-dehydropantoate 2-reductase | 0.36 | HEPCGN_22425 | atoD | acetate CoA-transferase subunit alpha | low | > 87 |
Escherichia coli BW25113 | 0.20 | b0425 | panE | 2-dehydropantoate 2-reductase (NCBI) | 0.37 | b2221 | atoD | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.20 | ECD_00373 | | 2-dehydropantoate reductase, NADPH-specific | 0.37 | ECD_02148 | | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit | low | > 61 |
Escherichia fergusonii Becca | 0.20 | EFB2_03632 | | 2-dehydropantoate 2-reductase | 0.36 | EFB2_01634 | | Acetate CoA-transferase subunit alpha | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_03251 | | 2-dehydropantoate 2-reductase | 0.37 | OHPLBJKB_01489 | | Acetate CoA-transferase subunit alpha | low | > 73 |
Escherichia coli ECOR27 | 0.20 | NOLOHH_01345 | panE | 2-dehydropantoate 2-reductase | 0.82 | NOLOHH_18990 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | low | > 75 |
Escherichia coli ECRC62 | 0.20 | BNILDI_22760 | panE | 2-dehydropantoate 2-reductase | 0.82 | BNILDI_17475 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | low | > 75 |
Shewanella amazonensis SB2B | 0.18 | Sama_2559 | | 2-dehydropantoate 2-reductase (RefSeq) | 0.74 | Sama_0518 | | 3-oxoacid CoA-transferase (RefSeq) | — | — |
Ralstonia sp. UNC404CL21Col | 0.16 | ABZR87_RS15450 | | 2-dehydropantoate 2-reductase | 0.57 | ABZR87_RS13770 | | CoA transferase subunit A | low | > 80 |
Herbaspirillum seropedicae SmR1 | 0.14 | HSERO_RS05755 | | 2-dehydropantoate 2-reductase | 0.56 | HSERO_RS23190 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.14 | RR42_RS32960 | | 2-dehydropantoate 2-reductase | 0.62 | RR42_RS06555 | | 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) | low | > 128 |
Not shown: 17 genomes with orthologs for Psyr_4088 only; 35 genomes with orthologs for Psyr_3237 only