Conservation of cofitness between Psyr_2523 and Psyr_2486 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2523 DNA polymerase III, alpha subunit 1.0 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.50 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2523 DNA polymerase III, alpha subunit 1.00 Psyr_2486 diguanylate cyclase/phosphodiesterase low > 86
Pseudomonas sp. SVBP6 0.74 COO64_RS07700 error-prone DNA polymerase 0.66 COO64_RS14580 bifunctional diguanylate cyclase/phosphodiesterase low > 93
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_5679 DNA polymerase III alpha subunit (EC 2.7.7.7) 0.71 Pf1N1B4_4670 Sensory box/GGDEF family protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_21820 DNA polymerase 0.71 AO356_22925 histidine kinase low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2085 DNA polymerase III alpha subunit (EC 2.7.7.7) 0.71 Pf6N2E2_467 Sensory box/GGDEF family protein low > 103
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_2822 DNA polymerase III alpha subunit (EC 2.7.7.7) 0.71 PfGW456L13_3263 Sensory box/GGDEF family protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_22715 DNA polymerase 0.70 AO353_22910 histidine kinase low > 101
Pseudomonas sp. DMC3 0.72 GFF3715 Error-prone DNA polymerase 0.70 GFF3504 putative signaling protein low > 89
Pseudomonas sp. RS175 0.72 PFR28_01355 Error-prone DNA polymerase 0.70 PFR28_02457 putative signaling protein low > 88
Pseudomonas simiae WCS417 0.72 PS417_15580 DNA polymerase 0.69 PS417_12760 histidine kinase low > 88
Pseudomonas orientalis W4I3 0.71 QF045_RS17570 error-prone DNA polymerase 0.69 QF045_RS17095 EAL domain-containing protein low > 93
Pseudomonas aeruginosa PA14 0.71 IKLFDK_02735 error-prone DNA polymerase 0.58 IKLFDK_08335 Uncharacterized signaling protein PA1727 low > 98
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS17565 error-prone DNA polymerase 0.70 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS17565 error-prone DNA polymerase 0.70 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase low > 109
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS09185 dnaE2;inference=COORDINATES error-prone DNA polymerase 0.58 DY961_RS20305 bifunctional diguanylate cyclase/phosphodiesterase low > 100
Pseudomonas lactucae CFBP13502 0.71 GEMAOFIL_03392 Error-prone DNA polymerase 0.68 GEMAOFIL_02800 putative signaling protein low > 96
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS58835 dnaE2;inference=COORDINATES error-prone DNA polymerase 0.58 DQ20_RS54400 bifunctional diguanylate cyclase/phosphodiesterase low > 101
Pseudomonas sp. BP01 0.70 JOY50_RS21460 error-prone DNA polymerase 0.67 JOY50_RS07335 bifunctional diguanylate cyclase/phosphodiesterase low > 84
Pseudomonas putida KT2440 0.68 PP_3119 error-prone DNA polymerase 0.67 PP_3581 conserved membrane protein of unknown function low > 96
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.3895.1 hypothetical protein 0.45 Xcc-8004.2826.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04985 error-prone DNA polymerase, DnaE-like 0.39 H281DRAFT_01476 diguanylate cyclase/phosphodiesterase 0.34 25
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS23930 error-prone DNA polymerase 0.53 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase low > 153
Paraburkholderia graminis OAS925 0.51 ABIE53_000204 error-prone DNA polymerase 0.35 ABIE53_005195 diguanylate cyclase (GGDEF)-like protein low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS00950 DNA polymerase 0.38 BPHYT_RS29225 diguanylate phosphodiesterase low > 109
Ralstonia solanacearum GMI1000 0.45 RS_RS20940 error-prone DNA polymerase 0.56 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS03300 error-prone DNA polymerase 0.58 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase low > 81
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS20560 error-prone DNA polymerase 0.55 ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase low > 80
Rhizobium sp. OAE497 0.44 ABIE40_RS27220 error-prone DNA polymerase 0.26 ABIE40_RS13060 bifunctional diguanylate cyclase/phosphodiesterase low > 107
Ralstonia solanacearum UW163 0.44 UW163_RS19260 error-prone DNA polymerase 0.58 UW163_RS01870 bifunctional diguanylate cyclase/phosphodiesterase — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS19915 error-prone DNA polymerase 0.58 RALBFv3_RS11715 bifunctional diguanylate cyclase/phosphodiesterase low > 76
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS32795 DNA polymerase III subunit alpha 0.56 RR42_RS22465 membrane protein low > 128
Agrobacterium fabrum C58 0.44 Atu5100 DNA polymerase III, alpha chain 0.26 Atu2226 GGDEF family protein low > 89
Variovorax sp. SCN45 0.43 GFF678 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) 0.36 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 127
Phaeobacter inhibens DSM 17395 0.41 PGA1_c00320 DNA polymerase III subunit alpha 0.24 PGA1_c31770 putative signaling protein with diguanylate cyclase/phosphodiesterase activity low > 62

Not shown: 30 genomes with orthologs for Psyr_2523 only; 10 genomes with orthologs for Psyr_2486 only