| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_2427 | | gamma-glutamylputrescine oxidase | 1.0 | Psyr_2422 | | transcriptional regulator, LysR family | 0.45 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_2427 | | gamma-glutamylputrescine oxidase | 1.00 | Psyr_2422 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas simiae WCS417 | 0.93 | PS417_18505 | | gamma-glutamylputrescine oxidoreductase | 0.83 | PS417_10445 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.93 | PFLU_RS20485 | | FAD-binding oxidoreductase | 0.84 | PFLU_RS10530 | | transcriptional activator NhaR | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.93 | PFLU_RS20485 | | FAD-binding oxidoreductase | 0.84 | PFLU_RS10530 | | transcriptional activator NhaR | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_6047 | | Nucleoside-diphosphate-sugar epimerases | 0.82 | Pf1N1B4_3936 | | Transcriptional regulator, LysR family | low | > 87 |
| Pseudomonas putida KT2440 | 0.92 | PP_2448 | | Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) | 0.75 | PP_2444 | | Transcriptional regulator, LysR family | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_21495 | | gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) | 0.80 | AO356_01805 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_20720 | | gamma-glutamylputrescine oxidoreductase | 0.83 | AO353_20115 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas sp. RS175 | 0.88 | PFR28_02805 | | Gamma-glutamylputrescine oxidoreductase | 0.78 | PFR28_01216 | | Transcriptional activator protein NhaR | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_3923 | | Nucleoside-diphosphate-sugar epimerases | 0.83 | PfGW456L13_2543 | | Transcriptional regulator, LysR family | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.84 | Pf6N2E2_80 | | gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) | 0.80 | Pf6N2E2_2228 | | Transcriptional regulator, LysR family | low | > 103 |
| Shewanella loihica PV-4 | 0.77 | Shew_0977 | | FAD dependent oxidoreductase (RefSeq) | 0.37 | Shew_1044 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.77 | Shewana3_3093 | | FAD dependent oxidoreductase (RefSeq) | 0.38 | Shewana3_3036 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.76 | SO1274 | | conserved hypothetical protein (NCBI ptt file) | 0.38 | SO1338 | nhaR | transcriptional activator protein NhaR (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.75 | Sama_2638 | | putative oxidoreductase (RefSeq) | 0.40 | Sama_0870 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.68 | HP15_944 | | FAD dependent oxidoreductase | 0.35 | HP15_1551 | | transcriptional Regulator, LysR family protein | low | > 73 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_04970 | puuB | gamma-glutamylputrescine oxidase | 0.36 | JDDGAC_14620 | nhaR | transcriptional activator NhaR | low | > 86 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_26350 | puuB | gamma-glutamylputrescine oxidase | 0.36 | KEDOAH_17130 | nhaR | transcriptional activator NhaR | — | — |
| Escherichia coli ECRC101 | 0.66 | MCAODC_15845 | puuB | gamma-glutamylputrescine oxidase | 0.36 | MCAODC_01540 | nhaR | transcriptional activator NhaR | low | > 87 |
| Escherichia coli BW25113 | 0.66 | b1301 | puuB | gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI) | 0.36 | b0020 | nhaR | DNA-binding transcriptional activator (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_02381 | | Gamma-glutamylputrescine oxidoreductase | 0.36 | OHPLBJKB_03641 | | Transcriptional activator protein NhaR | low | > 73 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_20110 | puuB | gamma-glutamylputrescine oxidase | 0.36 | NOLOHH_03355 | nhaR | transcriptional activator NhaR | low | > 75 |
| Escherichia coli BL21 | 0.66 | ECD_01278 | | gamma-glutamylputrescine oxidoreductase | 0.36 | ECD_00019 | | transcriptional activator of nhaA | low | > 61 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_25775 | puuB | gamma-glutamylputrescine oxidase | 0.36 | HEPCGN_09010 | nhaR | transcriptional activator NhaR | low | > 87 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_18260 | puuB | gamma-glutamylputrescine oxidase | 0.36 | BNILDI_08250 | nhaR | transcriptional activator NhaR | low | > 75 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_26595 | puuB | gamma-glutamylputrescine oxidase | 0.36 | NIAGMN_08875 | nhaR | transcriptional activator NhaR | — | — |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_02425 | puuB | gamma-glutamylputrescine oxidase | 0.36 | OKFHMN_11025 | nhaR | transcriptional activator NhaR | low | > 80 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS10690 | | gamma-glutamylputrescine oxidoreductase | 0.36 | BWI76_RS04320 | | transcriptional activator NhaR | low | > 92 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_10540 | | FAD-binding oxidoreductase | 0.36 | IAI46_03090 | | transcriptional activator NhaR | low | > 86 |
| Enterobacter asburiae PDN3 | 0.65 | EX28DRAFT_1502 | | Glycine/D-amino acid oxidases (deaminating) | 0.37 | EX28DRAFT_3629 | | Transcriptional regulator | low | > 76 |
| Pantoea sp. MT58 | 0.65 | IAI47_07110 | | FAD-binding oxidoreductase | 0.36 | IAI47_16160 | | transcriptional activator NhaR | low | > 76 |
| Rahnella sp. WP5 | 0.63 | EX31_RS17910 | | FAD-binding oxidoreductase | 0.35 | EX31_RS03885 | | transcriptional activator NhaR | low | > 89 |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_2227 | | FAD dependent oxidoreductase (RefSeq) | 0.21 | Dshi_0995 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Kangiella aquimarina DSM 16071 | 0.31 | B158DRAFT_1354 | | Glycine/D-amino acid oxidases (deaminating) | 0.23 | B158DRAFT_0581 | | transcriptional regulator, LysR family | low | > 40 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.28 | H281DRAFT_03219 | | gamma-glutamylputrescine oxidase | 0.45 | H281DRAFT_01823 | | transcriptional regulator, LysR family | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.26 | TX73_013660 | | FAD-dependent oxidoreductase | 0.21 | TX73_015515 | | LysR family transcriptional regulator | low | > 86 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS08075 | | FAD-binding oxidoreductase | 0.21 | ABIE41_RS20745 | | LysR family transcriptional regulator | low | > 77 |
| Alteromonas macleodii MIT1002 | 0.20 | MIT1002_03149 | | Gamma-glutamylputrescine oxidoreductase | 0.36 | MIT1002_03553 | | Na(+)/H(+) antiporter regulatory protein | low | > 70 |
| Pectobacterium carotovorum WPP14 | 0.12 | HER17_RS21315 | | FAD-binding oxidoreductase | 0.38 | HER17_RS02855 | | transcriptional activator NhaR | low | > 75 |
| Dickeya dadantii 3937 | 0.12 | DDA3937_RS09900 | | FAD-dependent oxidoreductase | 0.35 | DDA3937_RS18355 | | transcriptional activator NhaR | — | — |
Not shown: 11 genomes with orthologs for Psyr_2427 only; 14 genomes with orthologs for Psyr_2422 only