Conservation of cofitness between Psyr_0147 and Psyr_2304 in Pseudomonas syringae pv. syringae B728a

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 1.0 Psyr_2304 General substrate transporter:Major facilitator superfamily 0.27 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 1.00 Psyr_2304 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_28220 hydroxyacid dehydrogenase 0.17 AO353_06120 MFS transporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_26720 hydroxyacid dehydrogenase 0.19 AO356_08030 MFS transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_372 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.19 Pf6N2E2_3479 Niacin transporter NiaP low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.19 Pf1N1B4_1253 Niacin transporter NiaP — —
Pseudomonas fluorescens SBW25 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.85 PFLU_RS23620 MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.85 PFLU_RS23620 MFS transporter low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS32025 glyoxylate/hydroxypyruvate reductase A 0.50 QEN71_RS12985 MFS transporter low > 153
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS21550 glyoxylate/hydroxypyruvate reductase A 0.11 ABZR87_RS20975 MFS transporter low > 80
Paraburkholderia graminis OAS925 0.55 ABIE53_005027 glyoxylate/hydroxypyruvate reductase A 0.50 ABIE53_002895 putative MFS transporter low > 113
Ralstonia solanacearum PSI07 0.55 RPSI07_RS04655 glyoxylate/hydroxypyruvate reductase A 0.44 RPSI07_RS16560 MFS transporter low > 81
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_06341 glyoxylate/hydroxypyruvate reductase A 0.48 H281DRAFT_04765 MFS transporter, putative metabolite:H+ symporter low > 103
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS30215 D-2-hydroxyacid dehydrogenase 0.53 BPHYT_RS19990 MFS transporter — —
Pantoea sp. MT58 0.52 IAI47_07630 glyoxylate/hydroxypyruvate reductase A 0.61 IAI47_17650 MFS transporter low > 76
Dickeya dadantii 3937 0.51 DDA3937_RS07900 glyoxylate/hydroxypyruvate reductase A 0.58 DDA3937_RS12400 MFS transporter low > 74
Agrobacterium fabrum C58 0.51 Atu5222 2-hydroxyacid dehydrogenase 0.14 Atu5395 MFS permease — —
Sinorhizobium meliloti 1021 0.44 SMa1838 dehydrogenase 0.12 SMc04362 transporter low > 103
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS27410 hydroxyacid dehydrogenase 0.11 RR42_RS25805 hypothetical protein low > 128
Klebsiella michiganensis M5al 0.35 BWI76_RS21910 glyoxylate/hydroxypyruvate reductase A 0.58 BWI76_RS13905 MFS transporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3313 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.13 GFF200 Putative metabolite transport protein yaaU low > 78
Acinetobacter radioresistens SK82 0.33 MPMX26_01500 Glyoxylate/hydroxypyruvate reductase A 0.15 MPMX26_00139 Putative niacin/nicotinamide transporter NaiP — —
Escherichia coli BL21 0.32 ECD_01030 glyoxylate/hydroxypyruvate reductase A 0.14 ECD_00049 putative MFS sugar transporter; membrane protein low > 61
Escherichia coli ECRC100 0.32 OKFHMN_03880 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 OKFHMN_10875 yaaU Putative metabolite transport protein YaaU low > 80
Escherichia coli ECRC101 0.32 MCAODC_23240 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 MCAODC_01390 yaaU Putative metabolite transport protein YaaU low > 87
Escherichia coli ECRC99 0.32 KEDOAH_23875 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 KEDOAH_17280 yaaU Putative metabolite transport protein YaaU — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02633 Glyoxylate/hydroxypyruvate reductase A 0.15 OHPLBJKB_01957 Inner membrane metabolite transport protein YdjE low > 73
Escherichia fergusonii Becca 0.32 EFB2_02940 Glyoxylate/hydroxypyruvate reductase A 0.14 EFB2_02219 Inner membrane metabolite transport protein YdjE low > 86
Escherichia coli ECRC102 0.32 NIAGMN_23950 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 NIAGMN_08725 yaaU Putative metabolite transport protein YaaU — —
Escherichia coli ECRC98 0.32 JDDGAC_07540 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 JDDGAC_01325 ydjK Putative metabolite transport protein YdjK low > 86
Escherichia coli BW25113 0.32 b1033 ycdW putative dehydrogenase (VIMSS) 0.14 b1775 ydjK predicted transporter (NCBI) low > 76
Serratia liquefaciens MT49 0.32 IAI46_09955 glyoxylate/hydroxypyruvate reductase GhrA 0.61 IAI46_17035 MFS transporter low > 86
Escherichia coli ECOR27 0.32 NOLOHH_21410 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.15 NOLOHH_17280 ydjK Putative metabolite transport protein YdjK low > 75
Escherichia coli ECRC62 0.32 BNILDI_19570 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.15 BNILDI_16065 ydjK Putative metabolite transport protein YdjK low > 75
Escherichia coli ECOR38 0.32 HEPCGN_23610 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.14 HEPCGN_05140 ydjK Putative metabolite transport protein YdjK low > 87
Ralstonia solanacearum GMI1000 0.32 RS_RS01285 glyoxylate/hydroxypyruvate reductase A 0.19 RS_RS17445 MFS transporter low > 80
Variovorax sp. SCN45 0.32 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.19 GFF6590 Niacin transporter NiaP low > 127
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06000 glyoxylate/hydroxypyruvate reductase GhrA 0.14 ECOLIN_RS09900 MFS transporter — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_2327 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.10 PfGW456L13_3143 Permeases of the major facilitator superfamily low > 87
Pseudomonas sp. BP01 0.29 JOY50_RS06840 glyoxylate/hydroxypyruvate reductase A 0.11 JOY50_RS01510 MFS transporter low > 84

Not shown: 23 genomes with orthologs for Psyr_0147 only; 11 genomes with orthologs for Psyr_2304 only