Conservation of cofitness between Psyr_2427 and Psyr_1907 in Pseudomonas syringae pv. syringae B728a

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2427 gamma-glutamylputrescine oxidase 1.0 Psyr_1907 GTP cyclohydrolase I 0.42 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2427 gamma-glutamylputrescine oxidase 1.00 Psyr_1907 GTP cyclohydrolase I — —
Pseudomonas simiae WCS417 0.93 PS417_18505 gamma-glutamylputrescine oxidoreductase 0.80 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS20485 FAD-binding oxidoreductase 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas fluorescens SBW25 0.93 PFLU_RS20485 FAD-binding oxidoreductase 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas putida KT2440 0.92 PP_2448 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.74 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.22 47
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_6047 Nucleoside-diphosphate-sugar epimerases 0.79 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_21495 gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.78 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_20720 gamma-glutamylputrescine oxidoreductase 0.81 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 101
Pseudomonas sp. RS175 0.88 PFR28_02805 Gamma-glutamylputrescine oxidoreductase 0.79 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Pseudomonas sp. S08-1 0.87 OH686_22830 Gamma-glutamyl-putrescine oxidase 0.70 OH686_22700 queuine synthase low > 80
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_3923 Nucleoside-diphosphate-sugar epimerases 0.81 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_80 gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.78 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 103
Pseudomonas stutzeri RCH2 0.80 Psest_1966 Glycine/D-amino acid oxidases (deaminating) 0.75 Psest_2714 7-cyano-7-deazaguanine reductase low > 67
Shewanella loihica PV-4 0.77 Shew_0977 FAD dependent oxidoreductase (RefSeq) 0.48 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 60
Shewanella sp. ANA-3 0.77 Shewana3_3093 FAD dependent oxidoreductase (RefSeq) 0.47 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.76 SO1274 conserved hypothetical protein (NCBI ptt file) 0.46 SO1608 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.75 Sama_2638 putative oxidoreductase (RefSeq) 0.45 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.68 HP15_944 FAD dependent oxidoreductase 0.40 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Escherichia coli ECRC98 0.66 JDDGAC_04970 puuB gamma-glutamylputrescine oxidase 0.45 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Escherichia coli ECRC99 0.66 KEDOAH_26350 puuB gamma-glutamylputrescine oxidase 0.45 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC101 0.66 MCAODC_15845 puuB gamma-glutamylputrescine oxidase 0.45 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_02381 Gamma-glutamylputrescine oxidoreductase 0.44 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Escherichia coli BL21 0.66 ECD_01278 gamma-glutamylputrescine oxidoreductase 0.44 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) low > 61
Escherichia coli ECRC62 0.66 BNILDI_18260 puuB gamma-glutamylputrescine oxidase 0.45 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Escherichia coli ECOR27 0.66 NOLOHH_20110 puuB gamma-glutamylputrescine oxidase 0.45 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Escherichia coli BW25113 0.66 b1301 puuB gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI) 0.44 b2794 yqcD hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_25775 puuB gamma-glutamylputrescine oxidase 0.45 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli ECRC100 0.66 OKFHMN_02425 puuB gamma-glutamylputrescine oxidase 0.45 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Escherichia coli ECRC102 0.66 NIAGMN_26595 puuB gamma-glutamylputrescine oxidase 0.45 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Klebsiella michiganensis M5al 0.65 BWI76_RS10690 gamma-glutamylputrescine oxidoreductase 0.44 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 92
Serratia liquefaciens MT49 0.65 IAI46_10540 FAD-binding oxidoreductase 0.44 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1502 Glycine/D-amino acid oxidases (deaminating) 0.45 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase low > 76
Pantoea sp. MT58 0.65 IAI47_07110 FAD-binding oxidoreductase 0.43 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Rahnella sp. WP5 0.63 EX31_RS17910 FAD-binding oxidoreductase 0.46 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 89
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2201.1 glutamine synthetase family protein 0.40 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 74
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1354 Glycine/D-amino acid oxidases (deaminating) 0.42 B158DRAFT_2159 7-cyano-7-deazaguanine reductase low > 40
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_03219 gamma-glutamylputrescine oxidase 0.44 H281DRAFT_01889 7-cyano-7-deazaguanine reductase low > 103
Acinetobacter radioresistens SK82 0.23 MPMX26_02004 Gamma-glutamylputrescine oxidoreductase 0.37 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 36
Alteromonas macleodii MIT1002 0.20 MIT1002_03149 Gamma-glutamylputrescine oxidoreductase 0.41 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 70
Pectobacterium carotovorum WPP14 0.12 HER17_RS21315 FAD-binding oxidoreductase 0.45 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Dickeya dianthicola ME23 0.12 DZA65_RS10240 FAD-dependent oxidoreductase 0.44 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Dickeya dianthicola 67-19 0.12 HGI48_RS09905 FAD-dependent oxidoreductase 0.43 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 71
Dickeya dadantii 3937 0.12 DDA3937_RS09900 FAD-dependent oxidoreductase 0.44 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74

Not shown: 8 genomes with orthologs for Psyr_2427 only; 27 genomes with orthologs for Psyr_1907 only