Conservation of cofitness between Psyr_0506 and Psyr_1724 in Pseudomonas syringae pv. syringae B728a

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.0 Psyr_1724 glutamate dehydrogenase (NAD) 0.36 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.00 Psyr_1724 glutamate dehydrogenase (NAD) low > 86
Pseudomonas simiae WCS417 0.91 PS417_02175 transcriptional regulator 0.88 PS417_15075 NAD-glutamate dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.88 PFLU_RS17095 NAD-glutamate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.89 Pf1N1B4_4643 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.89 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.90 Pf6N2E2_634 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 103
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.88 PFLU_RS17095 NAD-glutamate dehydrogenase 0.27 24
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_09015 transcriptional regulator 0.90 AO356_24705 NAD-glutamate dehydrogenase low > 104
Pseudomonas sp. RS175 0.91 PFR28_05053 Bifunctional protein PutA 0.90 PFR28_01602 NAD-specific glutamate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.89 AO353_22820 NAD-glutamate dehydrogenase 0.54 1
Pseudomonas putida KT2440 0.88 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase 0.87 PP_2080 NAD-specific glutamate dehydrogenase low > 96
Pseudomonas sp. S08-1 0.76 OH686_06735 Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase 0.81 OH686_22265 NAD-specific glutamate dehydrogenase , large form low > 80
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.42 RR42_RS07270 NAD-glutamate dehydrogenase low > 128
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS03970 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.42 ABZR87_RS22605 NAD-glutamate dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS08725 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.41 RALBFv3_RS20390 NAD-glutamate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS04885 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.41 UW163_RS18785 NAD-glutamate dehydrogenase — —
Ralstonia solanacearum PSI07 0.68 RPSI07_RS08540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.41 RPSI07_RS18780 NAD-glutamate dehydrogenase low > 81
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS19355 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.42 BPHYT_RS22475 NAD-glutamate dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_02404 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase 0.41 H281DRAFT_03183 glutamate dehydrogenase (NAD) low > 103
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS29240 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.41 QEN71_RS20065 NAD-glutamate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.60 ABIE53_000244 RHH-type proline utilization regulon transcriptional repressor/proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase 0.41 ABIE53_004113 glutamate dehydrogenase low > 113
Azospirillum brasilense Sp245 0.56 AZOBR_RS23695 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.42 AZOBR_RS00190 L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) 0.48 6
Azospirillum sp. SherDot2 0.55 MPMX19_05932 Bifunctional protein PutA 0.40 MPMX19_04621 NAD-specific glutamate dehydrogenase 0.29 84
Sinorhizobium meliloti 1021 0.53 SMc02181 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.32 SMc04085 hypothetical protein 0.35 48
Agrobacterium fabrum C58 0.53 Atu4157 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.32 Atu2766 NAD-glutamate dehydrogenase 0.21 63
Rhizobium sp. OAE497 0.52 ABIE40_RS23445 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.31 ABIE40_RS19120 NAD-glutamate dehydrogenase low > 107
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_3926 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.28 Ga0059261_1252 NAD-specific glutamate dehydrogenase — —
Alteromonas macleodii MIT1002 0.38 MIT1002_00637 Bifunctional protein PutA 0.43 MIT1002_02034 NAD-specific glutamate dehydrogenase low > 70
Marinobacter adhaerens HP15 0.37 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.51 HP15_2269 NAD-specific glutamate dehydrogenase low > 73
Rhodospirillum rubrum S1H 0.36 Rru_A0656 delta-1-pyrroline-5-carboxylate dehydrogenase 3 (NCBI) 0.38 Rru_A3663 NAD-glutamate dehydrogenase (NCBI) low > 58

Not shown: 33 genomes with orthologs for Psyr_0506 only; 19 genomes with orthologs for Psyr_1724 only