Conservation of cofitness between Psyr_2484 and Psyr_1250 in Pseudomonas syringae pv. syringae B728a

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2484 Acriflavin resistance protein 1.0 Psyr_1250 conserved hypothetical protein 0.30 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2484 Acriflavin resistance protein 1.00 Psyr_1250 conserved hypothetical protein low > 86
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.79 PfGW456L13_4860 Mlr7403 protein — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_22900 acriflavine resistance protein B 0.83 AO353_15900 GTP-binding protein 0.29 62
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_25880 acriflavine resistance protein B 0.81 AO356_06580 GTP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.80 Pf6N2E2_3176 Mlr7403 protein — —
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS13435 MMPL family transporter 0.83 PFLU_RS24790 tetratricopeptide repeat protein 0.25 44
Pseudomonas fluorescens SBW25 0.80 PFLU_RS13435 MMPL family transporter 0.83 PFLU_RS24790 tetratricopeptide repeat protein low > 109
Pseudomonas putida KT2440 0.79 PP_3583 multidrug efflux transport system - membrane subunit 0.82 PP_0855 conserved protein of unknown function low > 96
Pseudomonas sp. RS175 0.79 PFR28_02193 Multidrug resistance protein MdtC 0.81 PFR28_00299 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.79 PS417_12750 acriflavine resistance protein B 0.83 PS417_23135 GTP-binding protein low > 88
Pseudomonas stutzeri RCH2 0.72 Psest_2140 Cation/multidrug efflux pump 0.70 Psest_1264 Uncharacterized protein conserved in bacteria — —
Pseudomonas sp. S08-1 0.69 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.75 OH686_17540 UPF0070 protein YfgM low > 80
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07655 nodulation protein 0.24 HSERO_RS14790 membrane protein low > 78
Enterobacter sp. TBS_079 0.55 MPMX20_03062 Multidrug resistance protein MdtC 0.20 MPMX20_03391 hypothetical protein low > 85
Serratia liquefaciens MT49 0.55 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.18 IAI46_19265 YfgM family protein low > 86
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0482 Cation/multidrug efflux pump 0.21 EX28DRAFT_0131 Uncharacterized protein conserved in bacteria low > 76
Ralstonia solanacearum GMI1000 0.55 RS_RS22920 nodulation protein 0.22 RS_RS06095 membrane protein — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS18115 nodulation protein 0.20 RALBFv3_RS15285 membrane protein — —
Ralstonia solanacearum UW163 0.54 UW163_RS21015 nodulation protein 0.20 UW163_RS12750 membrane protein — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05520 nodulation protein 0.22 RPSI07_RS18090 membrane protein low > 81
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.22 ABZR87_RS10925 tetratricopeptide repeat protein 0.50 72
Escherichia fergusonii Becca 0.54 EFB2_01779 Multidrug resistance protein MdtC 0.19 EFB2_01377 hypothetical protein low > 86
Pectobacterium carotovorum WPP14 0.54 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.19 HER17_RS06110 YfgM family protein low > 75
Escherichia coli Nissle 1917 0.54 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.19 ECOLIN_RS14280 ancillary SecYEG translocon subunit YfgM — —
Pantoea sp. MT58 0.54 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.20 IAI47_05065 YfgM family protein low > 76
Escherichia coli ECRC62 0.54 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 BNILDI_12185 yfgM ancillary SecYEG translocon subunit YfgM — —
Escherichia coli ECRC101 0.54 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 MCAODC_12265 yfgM ancillary SecYEG translocon subunit YfgM low > 87
Escherichia coli ECRC102 0.54 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 NIAGMN_19505 yfgM ancillary SecYEG translocon subunit YfgM — —
Escherichia coli ECRC100 0.54 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 OKFHMN_21735 yfgM ancillary SecYEG translocon subunit YfgM low > 80
Escherichia coli ECRC99 0.54 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 KEDOAH_06485 yfgM ancillary SecYEG translocon subunit YfgM — —
Escherichia coli BW25113 0.54 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.19 b2513 yfgM hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.54 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 JDDGAC_25410 yfgM ancillary SecYEG translocon subunit YfgM low > 86
Escherichia coli BL21 0.54 ECD_01981 multidrug efflux system, subunit C 0.19 ECD_02405 ancillary SecYEG translocon subunit; putative anti-RcsB factor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.19 OHPLBJKB_01196 hypothetical protein low > 73
Escherichia coli ECOR27 0.54 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.19 NOLOHH_13385 yfgM ancillary SecYEG translocon subunit YfgM low > 75
Escherichia coli ECOR38 0.54 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.18 HEPCGN_20855 yfgM ancillary SecYEG translocon subunit YfgM low > 87
Klebsiella michiganensis M5al 0.53 BWI76_RS19260 multidrug transporter subunit MdtC 0.18 BWI76_RS21075 membrane protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF3853 Multidrug transporter MdtC 0.17 GFF2410 Mlr7403 protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.22 GFF4861 Mlr7403 protein low > 90
Dickeya dianthicola 67-19 0.53 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.21 HGI48_RS15565 YfgM family protein low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.21 DZA65_RS16640 YfgM family protein 0.30 75
Dickeya dadantii 3937 0.52 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.20 DDA3937_RS15455 YfgM family protein low > 74
Castellaniella sp019104865 MT123 0.51 ABCV34_RS14625 efflux RND transporter permease subunit 0.23 ABCV34_RS02630 tetratricopeptide repeat protein — —
Rahnella sp. WP5 0.50 EX31_RS13375 MMPL family transporter 0.19 EX31_RS20500 YfgM family protein low > 89
Acidovorax sp. GW101-3H11 0.49 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.18 Ac3H11_1796 Mlr7403 protein — —
Erwinia tracheiphila SCR3 0.49 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.20 LU632_RS17790 YfgM family protein low > 74
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS29845 efflux RND transporter permease subunit 0.21 QEN71_RS05985 tetratricopeptide repeat protein low > 153

Not shown: 1 genomes with orthologs for Psyr_2484 only; 23 genomes with orthologs for Psyr_1250 only