Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_2704 | | UDP-galactose 4-epimerase | 1.0 | Psyr_1073 | | amino acid ABC transporter membrane protein 1, PAAT family | 0.27 | 11 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_2704 | | UDP-galactose 4-epimerase | 1.00 | Psyr_1073 | | amino acid ABC transporter membrane protein 1, PAAT family | low | > 86 |
Pseudomonas stutzeri RCH2 | 0.68 | Psest_0069 | | UDP-glucose-4-epimerase | 0.66 | Psest_3162 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 67 |
Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS10235 | | UDP-glucose 4-epimerase GalE | 0.30 | ABCV34_RS13100 | | ABC transporter permease subunit | low | > 48 |
Pseudomonas fluorescens FW300-N1B4 | 0.57 | Pf1N1B4_5092 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | 0.81 | Pf1N1B4_916 | | Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) | — | — |
Rahnella sp. WP5 | 0.56 | EX31_RS23580 | | UDP-glucose 4-epimerase GalE | 0.62 | EX31_RS12150 | | amino acid ABC transporter permease | low | > 89 |
Dickeya dianthicola 67-19 | 0.55 | HGI48_RS06635 | | UDP-glucose 4-epimerase GalE | 0.60 | HGI48_RS01250 | | amino acid ABC transporter permease | low | > 71 |
Dickeya dianthicola ME23 | 0.55 | DZA65_RS06990 | | UDP-glucose 4-epimerase GalE | 0.60 | DZA65_RS01295 | | amino acid ABC transporter permease | low | > 75 |
Dickeya dadantii 3937 | 0.55 | DDA3937_RS06615 | | UDP-glucose 4-epimerase GalE | 0.58 | DDA3937_RS01265 | | amino acid ABC transporter permease | low | > 74 |
Erwinia tracheiphila SCR3 | 0.55 | LU632_RS08830 | galE | UDP-glucose 4-epimerase GalE | 0.57 | LU632_RS19775 | | amino acid ABC transporter permease | low | > 74 |
Pantoea sp. MT58 | 0.54 | IAI47_07000 | | UDP-glucose 4-epimerase GalE | 0.59 | IAI47_02370 | | amino acid ABC transporter permease | low | > 76 |
Escherichia coli ECRC62 | 0.54 | BNILDI_14690 | galE | UDP-glucose 4-epimerase GalE | 0.60 | BNILDI_02100 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 75 |
Escherichia coli ECRC101 | 0.54 | MCAODC_25935 | galE | UDP-glucose 4-epimerase GalE | 0.60 | MCAODC_08150 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 87 |
Enterobacter sp. TBS_079 | 0.54 | MPMX20_01386 | | UDP-glucose 4-epimerase | 0.63 | MPMX20_04178 | | hypothetical protein | low | > 85 |
Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_18045 | | UDP-glucose 4-epimerase GalE | 0.51 | CSW01_06850 | | amino acid ABC transporter permease | low | > 62 |
Escherichia coli BW25113 | 0.54 | b0759 | galE | UDP-galactose-4-epimerase (VIMSS) | 0.60 | b3269 | yhdX | predicted amino-acid transporter subunit (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 0.54 | OKFHMN_06715 | galT | galactose-1-phosphate uridylyltransferase | 0.60 | OKFHMN_17630 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 80 |
Escherichia coli ECOR38 | 0.54 | HEPCGN_01560 | galT | galactose-1-phosphate uridylyltransferase | 0.59 | HEPCGN_16450 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 87 |
Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_2236 | | UDP-glucose-4-epimerase GalE | 0.63 | EX28DRAFT_3322 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 76 |
Escherichia coli ECRC99 | 0.54 | KEDOAH_21250 | galT | galactose-1-phosphate uridylyltransferase | 0.60 | KEDOAH_10520 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | — | — |
Escherichia fergusonii Becca | 0.54 | EFB2_03347 | | UDP-glucose 4-epimerase | 0.61 | EFB2_00554 | | hypothetical protein | low | > 86 |
Escherichia coli ECRC98 | 0.54 | JDDGAC_10370 | galT | galactose-1-phosphate uridylyltransferase | 0.60 | JDDGAC_21255 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 86 |
Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS04040 | | UDP-glucose 4-epimerase GalE | 0.61 | ECOLIN_RS18780 | | amino acid ABC transporter permease | low | > 55 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_02954 | | UDP-glucose 4-epimerase | 0.59 | OHPLBJKB_00435 | | hypothetical protein | low | > 73 |
Escherichia coli ECRC102 | 0.54 | NIAGMN_04765 | galT | galactose-1-phosphate uridylyltransferase | 0.60 | NIAGMN_15390 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | — | — |
Escherichia coli ECOR27 | 0.54 | NOLOHH_23145 | galE | UDP-glucose 4-epimerase GalE | 0.60 | NOLOHH_09420 | yhdX | Putative amino-acid ABC transporter permease protein YhdX | low | > 75 |
Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS14765 | | UDP-glucose 4-epimerase GalE | 0.60 | HER17_RS20295 | | amino acid ABC transporter permease | low | > 75 |
Variovorax sp. OAS795 | 0.50 | ABID97_RS05765 | | UDP-glucose 4-epimerase GalE | 0.48 | ABID97_RS13295 | | amino acid ABC transporter permease | low | > 91 |
Variovorax sp. SCN45 | 0.49 | GFF68 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | 0.29 | GFF1304 | | Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) | low | > 127 |
Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_3868 | | UDP-glucose 4-epimerase (RefSeq) | 0.35 | Dshi_0319 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | low | > 64 |
Synechococcus elongatus PCC 7942 | 0.37 | Synpcc7942_0320 | galE | UDP-galactose 4-epimerase | 0.31 | Synpcc7942_0247 | bgtB | ABC-type permease for basic amino acids and glutamine | — | — |
Azospirillum sp. SherDot2 | 0.36 | MPMX19_04151 | | UDP-glucose 4-epimerase | 0.53 | MPMX19_01337 | | hypothetical protein | low | > 112 |
Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS22395 | | UDP-glucose 4-epimerase | 0.54 | AZOBR_RS08660 | | ABC transporter permease | low | > 97 |
Agrobacterium fabrum C58 | 0.32 | Atu4166 | | UDP-glucose 4-epimerase | 0.49 | Atu1578 | | ABC transporter, membrane spanning protein (amino acid) | low | > 89 |
Phaeobacter inhibens DSM 17395 | 0.31 | PGA1_c34470 | | UDP-glucose 4-epimerase ExoB | 0.38 | PGA1_c01990 | | glutamate/glutamine/aspartate/asparagine transport system permease protein BztB | low | > 62 |
Rhodopseudomonas palustris CGA009 | 0.31 | TX73_023800 | | UDP-glucose 4-epimerase GalE | 0.47 | TX73_013245 | | ABC transporter permease subunit | low | > 86 |
Rhizobium sp. OAE497 | 0.31 | ABIE40_RS02650 | | UDP-glucose 4-epimerase GalE | 0.48 | ABIE40_RS08810 | | amino acid ABC transporter permease | low | > 107 |
Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_21135 | | UDP-galactose-4-epimerase | 0.85 | AO353_04610 | | amino acid ABC transporter permease | low | > 101 |
Marinobacter adhaerens HP15 | 0.31 | HP15_2048 | | UDP-glucose 4-epimerase | 0.54 | HP15_2195 | | amino acid ABC transporter, permease protein | low | > 73 |
Sinorhizobium meliloti 1021 | 0.30 | SMc02252 | | UDP-glucose 4-epimerase | 0.47 | SMc02119 | | ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 1 (from data) | low | > 103 |
Bosea sp. OAE506 | 0.28 | ABIE41_RS08585 | | UDP-glucose 4-epimerase GalE | 0.49 | ABIE41_RS16020 | | amino acid ABC transporter permease | — | — |
Pseudomonas putida KT2440 | 0.27 | PP_3129 | | UDP-glucose 4-epimerase | 0.79 | PP_1298 | | putative amino acid ABC transporter - permease subunit | low | > 96 |
Not shown: 42 genomes with orthologs for Psyr_2704 only; 10 genomes with orthologs for Psyr_1073 only