Conservation of cofitness between Psyr_2704 and Psyr_1073 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2704 UDP-galactose 4-epimerase 1.0 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family 0.27 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2704 UDP-galactose 4-epimerase 1.00 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family low > 86
Pseudomonas stutzeri RCH2 0.68 Psest_0069 UDP-glucose-4-epimerase 0.66 Psest_3162 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 67
Castellaniella sp019104865 MT123 0.62 ABCV34_RS10235 UDP-glucose 4-epimerase GalE 0.30 ABCV34_RS13100 ABC transporter permease subunit low > 48
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.81 Pf1N1B4_916 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
Rahnella sp. WP5 0.56 EX31_RS23580 UDP-glucose 4-epimerase GalE 0.62 EX31_RS12150 amino acid ABC transporter permease low > 89
Dickeya dianthicola 67-19 0.55 HGI48_RS06635 UDP-glucose 4-epimerase GalE 0.60 HGI48_RS01250 amino acid ABC transporter permease low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS06990 UDP-glucose 4-epimerase GalE 0.60 DZA65_RS01295 amino acid ABC transporter permease low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS06615 UDP-glucose 4-epimerase GalE 0.58 DDA3937_RS01265 amino acid ABC transporter permease low > 74
Erwinia tracheiphila SCR3 0.55 LU632_RS08830 galE UDP-glucose 4-epimerase GalE 0.57 LU632_RS19775 amino acid ABC transporter permease low > 74
Pantoea sp. MT58 0.54 IAI47_07000 UDP-glucose 4-epimerase GalE 0.59 IAI47_02370 amino acid ABC transporter permease low > 76
Escherichia coli ECRC62 0.54 BNILDI_14690 galE UDP-glucose 4-epimerase GalE 0.60 BNILDI_02100 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Escherichia coli ECRC101 0.54 MCAODC_25935 galE UDP-glucose 4-epimerase GalE 0.60 MCAODC_08150 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Enterobacter sp. TBS_079 0.54 MPMX20_01386 UDP-glucose 4-epimerase 0.63 MPMX20_04178 hypothetical protein low > 85
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_18045 UDP-glucose 4-epimerase GalE 0.51 CSW01_06850 amino acid ABC transporter permease low > 62
Escherichia coli BW25113 0.54 b0759 galE UDP-galactose-4-epimerase (VIMSS) 0.60 b3269 yhdX predicted amino-acid transporter subunit (NCBI) low > 76
Escherichia coli ECRC100 0.54 OKFHMN_06715 galT galactose-1-phosphate uridylyltransferase 0.60 OKFHMN_17630 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 80
Escherichia coli ECOR38 0.54 HEPCGN_01560 galT galactose-1-phosphate uridylyltransferase 0.59 HEPCGN_16450 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2236 UDP-glucose-4-epimerase GalE 0.63 EX28DRAFT_3322 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Escherichia coli ECRC99 0.54 KEDOAH_21250 galT galactose-1-phosphate uridylyltransferase 0.60 KEDOAH_10520 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia fergusonii Becca 0.54 EFB2_03347 UDP-glucose 4-epimerase 0.61 EFB2_00554 hypothetical protein low > 86
Escherichia coli ECRC98 0.54 JDDGAC_10370 galT galactose-1-phosphate uridylyltransferase 0.60 JDDGAC_21255 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 86
Escherichia coli Nissle 1917 0.54 ECOLIN_RS04040 UDP-glucose 4-epimerase GalE 0.61 ECOLIN_RS18780 amino acid ABC transporter permease low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_02954 UDP-glucose 4-epimerase 0.59 OHPLBJKB_00435 hypothetical protein low > 73
Escherichia coli ECRC102 0.54 NIAGMN_04765 galT galactose-1-phosphate uridylyltransferase 0.60 NIAGMN_15390 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia coli ECOR27 0.54 NOLOHH_23145 galE UDP-glucose 4-epimerase GalE 0.60 NOLOHH_09420 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Pectobacterium carotovorum WPP14 0.53 HER17_RS14765 UDP-glucose 4-epimerase GalE 0.60 HER17_RS20295 amino acid ABC transporter permease low > 75
Variovorax sp. OAS795 0.50 ABID97_RS05765 UDP-glucose 4-epimerase GalE 0.48 ABID97_RS13295 amino acid ABC transporter permease low > 91
Variovorax sp. SCN45 0.49 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.29 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) low > 127
Dinoroseobacter shibae DFL-12 0.42 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) 0.35 Dshi_0319 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 64
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_0320 galE UDP-galactose 4-epimerase 0.31 Synpcc7942_0247 bgtB ABC-type permease for basic amino acids and glutamine
Azospirillum sp. SherDot2 0.36 MPMX19_04151 UDP-glucose 4-epimerase 0.53 MPMX19_01337 hypothetical protein low > 112
Azospirillum brasilense Sp245 0.35 AZOBR_RS22395 UDP-glucose 4-epimerase 0.54 AZOBR_RS08660 ABC transporter permease low > 97
Agrobacterium fabrum C58 0.32 Atu4166 UDP-glucose 4-epimerase 0.49 Atu1578 ABC transporter, membrane spanning protein (amino acid) low > 89
Phaeobacter inhibens DSM 17395 0.31 PGA1_c34470 UDP-glucose 4-epimerase ExoB 0.38 PGA1_c01990 glutamate/glutamine/aspartate/asparagine transport system permease protein BztB low > 62
Rhodopseudomonas palustris CGA009 0.31 TX73_023800 UDP-glucose 4-epimerase GalE 0.47 TX73_013245 ABC transporter permease subunit low > 86
Rhizobium sp. OAE497 0.31 ABIE40_RS02650 UDP-glucose 4-epimerase GalE 0.48 ABIE40_RS08810 amino acid ABC transporter permease low > 107
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_21135 UDP-galactose-4-epimerase 0.85 AO353_04610 amino acid ABC transporter permease low > 101
Marinobacter adhaerens HP15 0.31 HP15_2048 UDP-glucose 4-epimerase 0.54 HP15_2195 amino acid ABC transporter, permease protein low > 73
Sinorhizobium meliloti 1021 0.30 SMc02252 UDP-glucose 4-epimerase 0.47 SMc02119 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 1 (from data) low > 103
Bosea sp. OAE506 0.28 ABIE41_RS08585 UDP-glucose 4-epimerase GalE 0.49 ABIE41_RS16020 amino acid ABC transporter permease
Pseudomonas putida KT2440 0.27 PP_3129 UDP-glucose 4-epimerase 0.79 PP_1298 putative amino acid ABC transporter - permease subunit low > 96

Not shown: 42 genomes with orthologs for Psyr_2704 only; 10 genomes with orthologs for Psyr_1073 only