Conservation of cofitness between Psyr_4754 and Psyr_0896 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.0 Psyr_0896 Aldose 1-epimerase 0.27 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.00 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas stutzeri RCH2 0.73 Psest_0255 RNA methyltransferase, RsmD family 0.27 Psest_0379 Galactose mutarotase and related enzymes — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.60 Pf6N2E2_484 Aldose 1-epimerase low > 103
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.54 Pf1N1B4_4509 Aldose 1-epimerase — —
Pseudomonas sp. RS175 0.71 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.60 PFR28_02441 putative protein YphB low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.60 AO356_23040 aldose epimerase low > 104
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.61 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.61 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.64 PfGW456L13_3510 Aldose 1-epimerase low > 87
Pseudomonas simiae WCS417 0.70 PS417_26825 16S rRNA methyltransferase 0.61 PS417_17385 aldose epimerase — —
Pseudomonas putida KT2440 0.68 PP_5114 putative adenine methyltransferase 0.57 PP_1165 conserved protein of unknown function low > 96
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D 0.25 OHPLBJKB_01165 putative protein YphB low > 73
Escherichia fergusonii Becca 0.48 EFB2_00351 Ribosomal RNA small subunit methyltransferase D 0.24 EFB2_01352 putative protein YphB low > 86
Escherichia coli ECOR38 0.48 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 HEPCGN_20690 yphB Uncharacterized protein YphB low > 87
Escherichia coli BW25113 0.48 b3465 yhhF predicted methyltransferase (NCBI) 0.25 b2544 yphB hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.48 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 ECOLIN_RS14405 aldose 1-epimerase low > 55
Escherichia coli ECRC62 0.48 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.25 BNILDI_12020 yphB Uncharacterized protein YphB low > 75
Escherichia coli ECOR27 0.48 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.25 NOLOHH_13220 yphB Uncharacterized protein YphB 0.48 47
Escherichia coli ECRC98 0.48 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 JDDGAC_25225 yphB Uncharacterized protein YphB low > 86
Escherichia coli ECRC102 0.48 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 NIAGMN_19320 yphB Uncharacterized protein YphB — —
Escherichia coli BL21 0.48 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent 0.25 ECD_02436 mutarotase superfamily protein, YphB family low > 61
Escherichia coli ECRC101 0.48 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 MCAODC_12080 yphB Uncharacterized protein YphB low > 87
Escherichia coli ECRC99 0.48 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 KEDOAH_06670 yphB Uncharacterized protein YphB — —
Escherichia coli ECRC100 0.48 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.24 OKFHMN_21550 yphB Uncharacterized protein YphB low > 80
Serratia liquefaciens MT49 0.48 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase 0.26 IAI46_21790 aldose 1-epimerase low > 86
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS02815 methyltransferase 0.33 BPHYT_RS16910 aldose 1-epimerase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.31 H281DRAFT_06302 aldose 1-epimerase low > 103
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.30 QEN71_RS27070 aldose 1-epimerase low > 153
Paraburkholderia graminis OAS925 0.33 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase 0.32 ABIE53_003549 aldose 1-epimerase low > 113
Castellaniella sp019104865 MT123 0.32 ABCV34_RS10145 RsmD family RNA methyltransferase 0.14 ABCV34_RS14765 aldose epimerase low > 48
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS20695 methyltransferase 0.34 HSERO_RS05165 galactose-1-epimerase low > 78
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.29 Ac3H11_616 Aldose 1-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00227 methyltransferase 0.21 CCNA_03432 aldose 1-epimerase low > 67
Caulobacter crescentus NA1000 0.29 CCNA_00227 methyltransferase 0.21 CCNA_03432 aldose 1-epimerase low > 66
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 RPSI07_RS11410 aldose 1-epimerase low > 81
Bosea sp. OAE506 0.28 ABIE41_RS23215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.15 ABIE41_RS03780 hypothetical protein low > 77
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.17 RALBFv3_RS14600 aldose 1-epimerase low > 76
Ralstonia solanacearum UW163 0.28 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.17 UW163_RS12070 aldose 1-epimerase — —
Ralstonia solanacearum GMI1000 0.28 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 RS_RS13780 aldose 1-epimerase low > 80
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.29 ABZR87_RS01460 aldose 1-epimerase low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS04215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.23 A4249_RS02080 aldose 1-epimerase low > 48

Not shown: 42 genomes with orthologs for Psyr_4754 only; 3 genomes with orthologs for Psyr_0896 only