Conservation of cofitness between Psyr_2132 and Psyr_0197 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2132 shikimate dehydrogenase 1.0 Psyr_0197 Mg chelatase-related protein 0.26 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2132 shikimate dehydrogenase 1.00 Psyr_0197 Mg chelatase-related protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_06175 shikimate dehydrogenase 0.85 AO353_09090 magnesium chelatase low > 101
Pseudomonas putida KT2440 0.73 PP_2406 putative quinate/shikimate dehydrogenase 0.77 PP_5239 putative ATP-dependent chelatase low > 96
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1427 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.85 PfGW456L13_835 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS26360 shikimate dehydrogenase 0.84 PFLU_RS29320 YifB family Mg chelatase-like AAA ATPase low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS26360 shikimate dehydrogenase 0.84 PFLU_RS29320 YifB family Mg chelatase-like AAA ATPase low > 109
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5061 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.86 Pf6N2E2_4404 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 103
Pseudomonas sp. RS175 0.72 PFR28_03811 Quinate/shikimate dehydrogenase (NAD(+)) 0.85 PFR28_04386 Competence protein ComM low > 88
Pseudomonas simiae WCS417 0.72 PS417_24435 shikimate dehydrogenase 0.82 PS417_27635 magnesium chelatase low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15590 shikimate dehydrogenase 0.85 AO356_12685 magnesium chelatase low > 104
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2749 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.84 Pf1N1B4_2162 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 87
Azospirillum sp. SherDot2 0.57 MPMX19_03526 Quinate/shikimate dehydrogenase (NAD(+)) 0.39 MPMX19_02482 Competence protein ComM low > 112
Ralstonia solanacearum PSI07 0.56 RPSI07_RS06205 shikimate dehydrogenase 0.49 RPSI07_RS22485 ATP-dependent protease low > 81
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS22685 shikimate 5-dehydrogenase 0.44 BPHYT_RS02535 magnesium chelatase subunit ChlI low > 109
Ralstonia solanacearum GMI1000 0.54 RS_RS23870 shikimate dehydrogenase 0.48 RS_RS01665 ATP-dependent protease low > 80
Paraburkholderia graminis OAS925 0.54 ABIE53_004075 shikimate dehydrogenase 0.44 ABIE53_000652 magnesium chelatase family protein low > 113
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS17445 shikimate dehydrogenase 0.48 RALBFv3_RS10825 ATP-dependent protease low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS21705 shikimate dehydrogenase 0.48 UW163_RS02755 ATP-dependent protease — —
Sinorhizobium meliloti 1021 0.52 SM_b20037 shikimate 5-dehydrogenase 0.38 SMc00420 hypothetical protein low > 103
Acidovorax sp. GW101-3H11 0.47 Ac3H11_1226 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.49 Ac3H11_3404 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 79
Castellaniella sp019104865 MT123 0.45 ABCV34_RS11525 shikimate dehydrogenase 0.47 ABCV34_RS04755 YifB family Mg chelatase-like AAA ATPase low > 48
Agrobacterium fabrum C58 0.44 Atu4532 shikimate 5-dehydrogenase 0.40 Atu0311 hypothetical protein low > 89
Bosea sp. OAE506 0.31 ABIE41_RS20015 shikimate dehydrogenase 0.41 ABIE41_RS03155 YifB family Mg chelatase-like AAA ATPase low > 77
Klebsiella michiganensis M5al 0.21 BWI76_RS04655 shikimate dehydrogenase 0.48 BWI76_RS00950 ATP-dependent protease low > 92
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase 0.43 Synpcc7942_1391 comM Mg chelatase-related protein — —
Fusobacterium nucleatum SB010 0.20 HUW76_10445 shikimate dehydrogenase 0.37 HUW76_01545 YifB family Mg chelatase-like AAA ATPase low > 35
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF3549 Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) 0.49 GFF2905 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF5018 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.45 GFF1924 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 90
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1145 Shikimate 5-dehydrogenase 0.44 Echvi_1735 Mg chelatase-related protein — —
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS14200 shikimate dehydrogenase 0.41 HMPREF1078_RS07245 YifB family Mg chelatase-like AAA ATPase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.17 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.41 BT2846 magnesium chelatase, subunit ChlI (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS06320 shikimate dehydrogenase 0.39 HMPREF1181_RS01265 YifB family Mg chelatase-like AAA ATPase low > 56
Variovorax sp. OAS795 0.15 ABID97_RS28755 shikimate dehydrogenase 0.48 ABID97_RS03620 YifB family Mg chelatase-like AAA ATPase low > 91
Variovorax sp. SCN45 0.14 GFF2599 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.41 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination low > 127

Not shown: 3 genomes with orthologs for Psyr_2132 only; 58 genomes with orthologs for Psyr_0197 only