Conservation of cofitness between Pf6N2E2_4435 and Pf6N2E2_5230 in Pseudomonas fluorescens FW300-N2E2

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_4435 Regulator of sigma D 1.0 Pf6N2E2_5230 COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA 0.31 16
Pseudomonas sp. RS175 0.99 PFR28_04361 Regulator of sigma D 0.87 PFR28_03646 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_12810 transcriptional regulator 0.95 AO356_16540 hypothetical protein 0.32 14
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2190 Regulator of sigma D 0.83 Pf1N1B4_2929 COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_861 Regulator of sigma D 0.82 PfGW456L13_1591 COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_08965 transcriptional regulator 0.81 AO353_14830 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.86 PS417_27505 transcriptional regulator 0.78 PS417_03675 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.78 PFLU_RS03725 DUF1722 domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.78 PFLU_RS03725 DUF1722 domain-containing protein low > 109
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 0.79 Psyr_0963 Protein of unknown function DUF523 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 0.79 Psyr_0963 Protein of unknown function DUF523 low > 86
Pseudomonas sp. S08-1 0.70 OH686_13925 Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD 0.53 OH686_07840 COG1683: Uncharacterized conserved protein /Hypothetical protein YbgA low > 80
Pseudomonas stutzeri RCH2 0.65 Psest_3743 Regulator of sigma D 0.64 Psest_2395 Uncharacterized conserved protein low > 67
Pseudomonas putida KT2440 0.64 PP_0191 Transcriptional regulatory protein AlgQ 0.68 PP_0741 conserved protein of unknown function low > 96
Marinobacter adhaerens HP15 0.46 HP15_221 anti-RNA polymerase sigma 70 factor 0.40 HP15_2897 uncharacterized conserved protein UCP037004 low > 73
Shewanella sp. ANA-3 0.32 Shewana3_0434 anti-RNA polymerase sigma 70 factor (RefSeq) 0.47 Shewana3_1164 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.32 Sama_0386 anti-RNA polymerase sigma 70 factor (RefSeq) 0.45 Sama_0810 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.31 Shew_3423 anti-RNA polymerase sigma 70 factor (RefSeq) 0.45 Shew_1478 hypothetical protein (RefSeq) low > 60
Klebsiella michiganensis M5al 0.30 BWI76_RS01560 Rsd/AlgQ family anti-sigma factor 0.40 BWI76_RS12545 hypothetical protein low > 92
Shewanella oneidensis MR-1 0.30 SO0433 rsd regulator of sigma D (NCBI ptt file) 0.48 SO3386 conserved hypothetical protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.28 IAI46_01325 Rsd/AlgQ family anti-sigma factor 0.40 IAI46_06195 DUF1722 domain-containing protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4197 Regulator of sigma D 0.35 GFF3578 COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA low > 78
Pantoea sp. MT58 0.27 IAI47_18080 Rsd/AlgQ family anti-sigma factor 0.39 IAI47_13820 DUF1722 domain-containing protein low > 76
Pectobacterium carotovorum WPP14 0.26 HER17_RS20375 Rsd/AlgQ family anti-sigma factor 0.42 HER17_RS15000 2-thiouracil desulfurase family protein low > 75
Enterobacter sp. TBS_079 0.26 MPMX20_00218 Regulator of sigma D 0.40 MPMX20_00071 hypothetical protein low > 85
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.44 CSW01_14310 DUF1722 domain-containing protein low > 62
Rahnella sp. WP5 0.25 EX31_RS16820 Rsd/AlgQ family anti-sigma factor 0.42 EX31_RS23360 DUF1722 domain-containing protein low > 89
Escherichia coli ECOR38 0.25 HEPCGN_12005 rsd sigma D regulator 0.37 HEPCGN_00075 DUF1722 domain-containing protein low > 87
Enterobacter asburiae PDN3 0.25 EX28DRAFT_4537 Regulator of sigma D 0.40 EX28DRAFT_3925 Uncharacterized conserved protein low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_04055 Regulator of sigma D 0.38 OHPLBJKB_02152 hypothetical protein low > 73
Erwinia tracheiphila SCR3 0.22 LU632_RS00975 Rsd/AlgQ family anti-sigma factor 0.38 LU632_RS16160 2-thiouracil desulfurase family protein low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS01175 sigma D regulator 0.41 HGI48_RS06445 DUF1722 domain-containing protein low > 71
Dickeya dadantii 3937 0.20 DDA3937_RS01180 Rsd/AlgQ family anti-sigma factor 0.42 DDA3937_RS06400 DUF1722 domain-containing protein low > 74
Dickeya dianthicola ME23 0.20 DZA65_RS01220 Rsd/AlgQ family anti-sigma factor 0.41 DZA65_RS06790 DUF1722 domain-containing protein low > 75

Not shown: 12 genomes with orthologs for Pf6N2E2_4435 only; 5 genomes with orthologs for Pf6N2E2_5230 only