| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_180 | | Transcriptional regulator, MerR family | 1.0 | Pf6N2E2_2756 | | RNA polymerase sigma-H factor AlgT | 0.34 | 15 |
| Pseudomonas sp. RS175 | 1.00 | PFR28_02718 | | hypothetical protein | 1.00 | PFR28_00690 | | RNA polymerase sigma-H factor | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 1.00 | AO356_00875 | | MerR family transcriptional regulator | 1.00 | AO356_04575 | | RNA polymerase subunit sigma | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 1.00 | AO353_20910 | | MerR family transcriptional regulator | 0.99 | AO353_17625 | | RNA polymerase subunit sigma | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 1.00 | PfGW456L13_3893 | | Transcriptional regulator, MerR family | 1.00 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 1.00 | Pf1N1B4_6016 | | Transcriptional regulator, MerR family | 1.00 | Pf1N1B4_3323 | | RNA polymerase sigma-H factor AlgT | — | — |
| Pseudomonas simiae WCS417 | 0.97 | PS417_18310 | | hypothetical protein | 1.00 | PS417_07120 | | RNA polymerase sigma-H factor | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS20285 | | MerR family transcriptional regulator | 1.00 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS20285 | | MerR family transcriptional regulator | 1.00 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Pseudomonas sp. S08-1 | 0.95 | OH686_22875 | | Transcriptional regulator, MerR family | 0.97 | OH686_20045 | | RNA polymerase sigma factor RpoE | low | > 80 |
| Pseudomonas putida KT2440 | 0.94 | PP_2472 | | putative transcriptional regulator, MerR family | 0.99 | PP_1427 | | RNA polymerase sigma E factor | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.94 | Psest_1975 | | Predicted transcriptional regulators | 0.94 | Psest_3100 | | RNA polymerase sigma factor RpoE | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_2169 | | transcriptional regulator, MerR family | 0.97 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_2169 | | transcriptional regulator, MerR family | 0.97 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.40 | 3 |
| Lysobacter sp. OAE881 | 0.74 | ABIE51_RS15235 | | MerR family transcriptional regulator | 0.63 | ABIE51_RS13890 | | RNA polymerase sigma factor RpoE | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.73 | ABZR86_RS09660 | | MerR family transcriptional regulator | 0.66 | ABZR86_RS07180 | | RNA polymerase sigma factor RpoE | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.73 | LRK54_RS03195 | | MerR family transcriptional regulator | 0.67 | LRK54_RS16940 | | RNA polymerase sigma factor RpoE | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.73 | Xcc-8004.2074.1 | | Transcriptional regulator, MerR family | 0.63 | Xcc-8004.3681.1 | | RNA polymerase sigma factor RpoE | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.73 | LRK55_RS02945 | | MerR family transcriptional regulator | 0.67 | LRK55_RS16655 | | RNA polymerase sigma factor RpoE | — | — |
| Rhodanobacter sp. FW510-T8 | 0.73 | OKGIIK_10075 | soxR | MerR family transcriptional regulator | 0.67 | OKGIIK_07900 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_1263 | | Predicted transcriptional regulators | 0.70 | B158DRAFT_2180 | | RNA polymerase, sigma-24 subunit, RpoE | — | — |
| Dechlorosoma suillum PS | 0.59 | Dsui_1965 | | putative transcriptional regulator | 0.61 | Dsui_2453 | | RNA polymerase sigma factor RpoE | — | — |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS09915 | | transcriptional regulator | 0.62 | HSERO_RS09625 | | RNA polymerase sigma factor RpoE | — | — |
| Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS04720 | | MerR family transcriptional regulator | 0.59 | ABCV34_RS08355 | | RNA polymerase sigma factor RpoE | — | — |
| Bacteroides ovatus ATCC 8483 | 0.29 | BACOVA_04816 | | transcriptional regulator, MerR family | 0.22 | BACOVA_00669 | | Sigma-70 region 2 | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS15865 | | MerR family transcriptional regulator | 0.25 | ABZR88_RS19220 | | sigma-70 family RNA polymerase sigma factor | low | > 71 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.26 | BT3997 | | transcriptional regulator (NCBI ptt file) | 0.23 | BT4571 | | RNA polymerase ECF-type sigma factor (NCBI ptt file) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.26 | HMPREF1078_RS04410 | | MerR family transcriptional regulator | 0.21 | HMPREF1078_RS13725 | | sigma-70 family RNA polymerase sigma factor | — | — |
Not shown: 1 genomes with orthologs for Pf6N2E2_180 only; 56 genomes with orthologs for Pf6N2E2_2756 only