Conservation of cofitness between Pf1N1B4_2147 and Pf1N1B4_3349 in Pseudomonas fluorescens FW300-N1B4

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2147 Putrescine utilization regulator 1.0 Pf1N1B4_3349 YcgN (Fragment) 0.27 19
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29365 cupin domain-containing protein 0.94 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas simiae WCS417 0.99 PS417_27690 XRE family transcriptional regulator 0.94 PS417_07400 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29365 cupin domain-containing protein 0.94 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_12635 XRE family transcriptional regulator 0.97 AO356_04400 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_09140 XRE family transcriptional regulator 0.97 AO353_17875 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4394 Putrescine utilization regulator 0.95 Pf6N2E2_2723 YcgN (Fragment) low > 103
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_815 Putrescine utilization regulator 0.98 PfGW456L13_4492 YcgN (Fragment) low > 87
Pseudomonas sp. RS175 0.97 PFR28_04396 HTH-type transcriptional regulator PuuR 0.96 PFR28_00716 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0238 Helix-turn-helix motif protein 0.93 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0238 Helix-turn-helix motif protein 0.93 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas putida KT2440 0.89 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine 0.84 PP_4587 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.83 OH686_13700 Putrescine utilization regulator 0.90 OH686_05300 UPF0260 protein YcgN low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_3791 Predicted transcriptional regulators 0.86 Psest_2992 Uncharacterized conserved protein low > 67
Shewanella oneidensis MR-1 0.71 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.42 SO2573 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_0970 XRE family transcriptional regulator (RefSeq) 0.43 Shew_2181 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.70 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.44 Shewana3_2379 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.70 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.43 Sama_1927 hypothetical protein (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.53 Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) 0.43 Rru_A3355 Uncharacterized conserved protein UCP006173 (NCBI) low > 58
Sinorhizobium meliloti 1021 0.48 SMc04387 aldehyde dehydrogenase 0.55 SMc00064 hypothetical protein low > 103
Bosea sp. OAE506 0.47 ABIE41_RS05345 cupin domain-containing protein 0.48 ABIE41_RS22395 YcgN family cysteine cluster protein low > 77
Agrobacterium fabrum C58 0.47 Atu3328 aldehyde dehydrogenase 0.53 Atu0932 hypothetical protein low > 89
Pantoea sp. MT58 0.41 IAI47_07115 HTH-type transcriptional regulator PuuR 0.50 IAI47_08870 YcgN family cysteine cluster protein 0.39 63
Escherichia coli ECRC98 0.37 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.52 JDDGAC_06265 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC101 0.37 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.52 MCAODC_21925 ycgN YcgN family cysteine cluster protein low > 87
Serratia liquefaciens MT49 0.37 IAI46_17165 HTH-type transcriptional regulator PuuR 0.49 IAI46_14490 YcgN family cysteine cluster protein low > 86
Escherichia coli ECRC100 0.37 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.52 OKFHMN_28245 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC102 0.37 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.52 NIAGMN_27975 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECOR27 0.37 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.52 NOLOHH_20775 ycgN YcgN family cysteine cluster protein low > 75
Escherichia coli BL21 0.37 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.51 ECD_01156 UPF0153 family cysteine cluster protein — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1500 Predicted transcriptional regulators 0.51 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.52 OHPLBJKB_02510 hypothetical protein low > 73
Rahnella sp. WP5 0.37 EX31_RS17905 HTH-type transcriptional regulator PuuR 0.44 EX31_RS10560 YcgN family cysteine cluster protein low > 89
Escherichia coli ECOR38 0.37 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.52 HEPCGN_24695 ycgN YcgN family cysteine cluster protein low > 87
Escherichia coli BW25113 0.37 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.52 b1181 ycgN conserved protein (RefSeq) low > 76
Escherichia coli ECRC99 0.37 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.52 KEDOAH_25260 ycgN YcgN family cysteine cluster protein — —
Klebsiella michiganensis M5al 0.37 BWI76_RS10700 XRE family transcriptional regulator 0.52 BWI76_RS17765 hypothetical protein low > 92
Phaeobacter inhibens DSM 17395 0.18 PGA1_c28440 putative transcriptional regulator 0.48 PGA1_c25000 Uncharacterized conserved protein low > 62

Not shown: 19 genomes with orthologs for Pf1N1B4_2147 only; 22 genomes with orthologs for Pf1N1B4_3349 only