Conservation of cofitness between Pf1N1B4_1236 and Pf1N1B4_1869 in Pseudomonas fluorescens FW300-N1B4

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1236 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 1.0 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.46 10
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_5152 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.92 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_06050 exodeoxyribonuclease V subunit gamma 0.89 AO353_10900 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3461 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.82 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB low > 103
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_07920 exodeoxyribonuclease V subunit gamma 0.82 AO356_11495 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.87 PS417_23780 exodeoxyribonuclease V subunit gamma 0.85 PS417_00375 membrane protein
Pseudomonas sp. RS175 0.86 PFR28_00006 RecBCD enzyme subunit RecC 0.85 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB low > 88
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS25595 exodeoxyribonuclease V subunit gamma 0.85 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB low > 109
Pseudomonas fluorescens SBW25 0.86 PFLU_RS25595 exodeoxyribonuclease V subunit gamma 0.85 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0680 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.90 Psyr_0278 ABC-3 low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0680 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.90 Psyr_0278 ABC-3 low > 86
Pseudomonas putida KT2440 0.74 PP_4674 ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit 0.78 PP_0117 Zn(2+) ABC transporter - permease subunit
Rahnella sp. WP5 0.50 EX31_RS20740 exodeoxyribonuclease V subunit gamma 0.51 EX31_RS10685 zinc ABC transporter permease subunit ZnuB
Paraburkholderia graminis OAS925 0.49 ABIE53_000494 exodeoxyribonuclease V gamma subunit 0.15 ABIE53_003400 zinc/manganese transport system permease protein low > 113
Dickeya dianthicola 67-19 0.48 HGI48_RS11105 exodeoxyribonuclease V subunit gamma 0.50 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB
Dickeya dadantii 3937 0.48 DDA3937_RS11085 exodeoxyribonuclease V subunit gamma 0.49 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB
Dickeya dianthicola ME23 0.48 DZA65_RS11485 exodeoxyribonuclease V subunit gamma 0.51 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB
Marinobacter adhaerens HP15 0.40 HP15_3714 exodeoxyribonuclease V, gamma subunit 0.59 HP15_3523 zinc ABC transporter, permease protein
Pectobacterium carotovorum WPP14 0.28 HER17_RS16535 exodeoxyribonuclease V subunit gamma 0.49 HER17_RS11815 zinc ABC transporter permease subunit ZnuB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00908 RecBCD enzyme subunit RecC 0.54 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB low > 73
Escherichia fergusonii Becca 0.28 EFB2_01062 RecBCD enzyme subunit RecC 0.55 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB low > 86
Escherichia coli ECOR38 0.28 HEPCGN_19295 recC exodeoxyribonuclease V subunit gamma 0.55 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB low > 87
Escherichia coli ECRC62 0.28 BNILDI_10405 recC exodeoxyribonuclease V subunit gamma 0.55 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB low > 75
Escherichia coli ECOR27 0.28 NOLOHH_11925 recC exodeoxyribonuclease V subunit gamma 0.55 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli BW25113 0.28 b2822 recC exonuclease V (RecBCD complex), gamma chain (NCBI) 0.54 b1859 znuB high-affinity zinc transporter membrane component (NCBI) low > 76
Escherichia coli ECRC100 0.28 OKFHMN_20040 recC exodeoxyribonuclease V subunit gamma 0.54 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC102 0.28 NIAGMN_17810 recC exodeoxyribonuclease V subunit gamma 0.54 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli BL21 0.28 ECD_02670 exonuclease V (RecBCD complex), gamma chain 0.55 ECD_01830 zinc ABC transporter permease low > 61
Escherichia coli ECRC99 0.28 KEDOAH_08090 recC exodeoxyribonuclease V subunit gamma 0.54 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC98 0.28 JDDGAC_23705 recC exodeoxyribonuclease V subunit gamma 0.54 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC101 0.28 MCAODC_10565 recC exodeoxyribonuclease V subunit gamma 0.54 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli Nissle 1917 0.28 ECOLIN_RS15840 exodeoxyribonuclease V subunit gamma 0.55 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB
Serratia liquefaciens MT49 0.27 IAI46_20415 exodeoxyribonuclease V subunit gamma 0.51 IAI46_14615 zinc ABC transporter permease subunit ZnuB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF1303 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.55 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB low > 78
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_11785 exonuclease V subunit gamma 0.51 CSW01_10410 zinc ABC transporter permease low > 62
Enterobacter sp. TBS_079 0.27 MPMX20_03685 RecBCD enzyme subunit RecC 0.56 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB low > 85
Erwinia tracheiphila SCR3 0.27 LU632_RS06180 recC exodeoxyribonuclease V subunit gamma 0.54 LU632_RS13405 znuB zinc ABC transporter permease subunit ZnuB
Klebsiella michiganensis M5al 0.27 BWI76_RS23240 exonuclease V subunit gamma 0.55 BWI76_RS18140 zinc ABC transporter permease low > 92
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2897 DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) 0.55 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components
Pantoea sp. MT58 0.26 IAI47_03955 exodeoxyribonuclease V subunit gamma 0.53 IAI47_08455 zinc ABC transporter permease subunit ZnuB
Pseudomonas stutzeri RCH2 0.21 Psest_0212 exodeoxyribonuclease V, gamma subunit 0.78 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components low > 67
Pseudomonas sp. S08-1 0.20 OH686_12080 exodeoxyribonuclease V, gamma subunit 0.69 OH686_12250 Zinc ABC transporter, permease protein ZnuB low > 80
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS23195 exodeoxyribonuclease V subunit gamma 0.14 QEN71_RS02565 metal ABC transporter permease
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_05085 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.14 H281DRAFT_04164 zinc/manganese transport system permease protein low > 103
Burkholderia phytofirmans PsJN 0.14 BPHYT_RS07970 exodeoxyribonuclease V subunit gamma 0.16 BPHYT_RS01385 cation ABC transporter permease
Acinetobacter radioresistens SK82 0.09 MPMX26_00271 RecBCD enzyme subunit RecC 0.24 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB low > 36

Not shown: 12 genomes with orthologs for Pf1N1B4_1236 only; 11 genomes with orthologs for Pf1N1B4_1869 only