Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas fluorescens FW300-N1B4 | 1.0 | Pf1N1B4_1236 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | 1.0 | Pf1N1B4_1869 | | Zinc ABC transporter, inner membrane permease protein ZnuB | 0.46 | 10 |
Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_5152 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | 0.92 | PfGW456L13_600 | | Zinc ABC transporter, inner membrane permease protein ZnuB | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_06050 | | exodeoxyribonuclease V subunit gamma | 0.89 | AO353_10900 | | hypothetical protein | low | > 101 |
Pseudomonas fluorescens FW300-N2E2 | 0.88 | Pf6N2E2_3461 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | 0.82 | Pf6N2E2_4168 | | Zinc ABC transporter, inner membrane permease protein ZnuB | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_07920 | | exodeoxyribonuclease V subunit gamma | 0.82 | AO356_11495 | | hypothetical protein | low | > 104 |
Pseudomonas simiae WCS417 | 0.87 | PS417_23780 | | exodeoxyribonuclease V subunit gamma | 0.85 | PS417_00375 | | membrane protein | — | — |
Pseudomonas sp. RS175 | 0.86 | PFR28_00006 | | RecBCD enzyme subunit RecC | 0.85 | PFR28_04618 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 88 |
Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | 0.85 | PFLU_RS00365 | | zinc ABC transporter permease subunit ZnuB | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | 0.85 | PFLU_RS00365 | | zinc ABC transporter permease subunit ZnuB | low | > 109 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.78 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | 0.90 | Psyr_0278 | | ABC-3 | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.78 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | 0.90 | Psyr_0278 | | ABC-3 | low | > 86 |
Pseudomonas putida KT2440 | 0.74 | PP_4674 | | ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit | 0.78 | PP_0117 | | Zn(2+) ABC transporter - permease subunit | — | — |
Rahnella sp. WP5 | 0.50 | EX31_RS20740 | | exodeoxyribonuclease V subunit gamma | 0.51 | EX31_RS10685 | | zinc ABC transporter permease subunit ZnuB | — | — |
Paraburkholderia graminis OAS925 | 0.49 | ABIE53_000494 | | exodeoxyribonuclease V gamma subunit | 0.15 | ABIE53_003400 | | zinc/manganese transport system permease protein | low | > 113 |
Dickeya dianthicola 67-19 | 0.48 | HGI48_RS11105 | | exodeoxyribonuclease V subunit gamma | 0.50 | HGI48_RS10120 | | zinc ABC transporter permease subunit ZnuB | — | — |
Dickeya dadantii 3937 | 0.48 | DDA3937_RS11085 | | exodeoxyribonuclease V subunit gamma | 0.49 | DDA3937_RS10090 | | zinc ABC transporter permease subunit ZnuB | — | — |
Dickeya dianthicola ME23 | 0.48 | DZA65_RS11485 | | exodeoxyribonuclease V subunit gamma | 0.51 | DZA65_RS10535 | | zinc ABC transporter permease subunit ZnuB | — | — |
Marinobacter adhaerens HP15 | 0.40 | HP15_3714 | | exodeoxyribonuclease V, gamma subunit | 0.59 | HP15_3523 | | zinc ABC transporter, permease protein | — | — |
Pectobacterium carotovorum WPP14 | 0.28 | HER17_RS16535 | | exodeoxyribonuclease V subunit gamma | 0.49 | HER17_RS11815 | | zinc ABC transporter permease subunit ZnuB | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.28 | OHPLBJKB_00908 | | RecBCD enzyme subunit RecC | 0.54 | OHPLBJKB_01869 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 73 |
Escherichia fergusonii Becca | 0.28 | EFB2_01062 | | RecBCD enzyme subunit RecC | 0.55 | EFB2_02083 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 86 |
Escherichia coli ECOR38 | 0.28 | HEPCGN_19295 | recC | exodeoxyribonuclease V subunit gamma | 0.55 | HEPCGN_04700 | znuB | zinc ABC transporter permease subunit ZnuB | low | > 87 |
Escherichia coli ECRC62 | 0.28 | BNILDI_10405 | recC | exodeoxyribonuclease V subunit gamma | 0.55 | BNILDI_15525 | znuB | zinc ABC transporter permease subunit ZnuB | low | > 75 |
Escherichia coli ECOR27 | 0.28 | NOLOHH_11925 | recC | exodeoxyribonuclease V subunit gamma | 0.55 | NOLOHH_16735 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli BW25113 | 0.28 | b2822 | recC | exonuclease V (RecBCD complex), gamma chain (NCBI) | 0.54 | b1859 | znuB | high-affinity zinc transporter membrane component (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 0.28 | OKFHMN_20040 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | OKFHMN_26295 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli ECRC102 | 0.28 | NIAGMN_17810 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | NIAGMN_01765 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli BL21 | 0.28 | ECD_02670 | | exonuclease V (RecBCD complex), gamma chain | 0.55 | ECD_01830 | | zinc ABC transporter permease | low | > 61 |
Escherichia coli ECRC99 | 0.28 | KEDOAH_08090 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | KEDOAH_01810 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli ECRC98 | 0.28 | JDDGAC_23705 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | JDDGAC_00870 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli ECRC101 | 0.28 | MCAODC_10565 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | MCAODC_19110 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS15840 | | exodeoxyribonuclease V subunit gamma | 0.55 | ECOLIN_RS10355 | | zinc ABC transporter permease subunit ZnuB | — | — |
Serratia liquefaciens MT49 | 0.27 | IAI46_20415 | | exodeoxyribonuclease V subunit gamma | 0.51 | IAI46_14615 | | zinc ABC transporter permease subunit ZnuB | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.27 | GFF1303 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | 0.55 | GFF1638 | | Zinc ABC transporter, inner membrane permease protein ZnuB | low | > 78 |
Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_11785 | | exonuclease V subunit gamma | 0.51 | CSW01_10410 | | zinc ABC transporter permease | low | > 62 |
Enterobacter sp. TBS_079 | 0.27 | MPMX20_03685 | | RecBCD enzyme subunit RecC | 0.56 | MPMX20_02765 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 85 |
Erwinia tracheiphila SCR3 | 0.27 | LU632_RS06180 | recC | exodeoxyribonuclease V subunit gamma | 0.54 | LU632_RS13405 | znuB | zinc ABC transporter permease subunit ZnuB | — | — |
Klebsiella michiganensis M5al | 0.27 | BWI76_RS23240 | | exonuclease V subunit gamma | 0.55 | BWI76_RS18140 | | zinc ABC transporter permease | low | > 92 |
Enterobacter asburiae PDN3 | 0.27 | EX28DRAFT_2897 | | DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) | 0.55 | EX28DRAFT_0697 | | ABC-type Mn2+/Zn2+ transport systems, permease components | — | — |
Pantoea sp. MT58 | 0.26 | IAI47_03955 | | exodeoxyribonuclease V subunit gamma | 0.53 | IAI47_08455 | | zinc ABC transporter permease subunit ZnuB | — | — |
Pseudomonas stutzeri RCH2 | 0.21 | Psest_0212 | | exodeoxyribonuclease V, gamma subunit | 0.78 | Psest_4310 | | ABC-type Mn2+/Zn2+ transport systems, permease components | low | > 67 |
Pseudomonas sp. S08-1 | 0.20 | OH686_12080 | | exodeoxyribonuclease V, gamma subunit | 0.69 | OH686_12250 | | Zinc ABC transporter, permease protein ZnuB | low | > 80 |
Paraburkholderia sabiae LMG 24235 | 0.15 | QEN71_RS23195 | | exodeoxyribonuclease V subunit gamma | 0.14 | QEN71_RS02565 | | metal ABC transporter permease | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.15 | H281DRAFT_05085 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | 0.14 | H281DRAFT_04164 | | zinc/manganese transport system permease protein | low | > 103 |
Burkholderia phytofirmans PsJN | 0.14 | BPHYT_RS07970 | | exodeoxyribonuclease V subunit gamma | 0.16 | BPHYT_RS01385 | | cation ABC transporter permease | — | — |
Acinetobacter radioresistens SK82 | 0.09 | MPMX26_00271 | | RecBCD enzyme subunit RecC | 0.24 | MPMX26_00093 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 36 |
Not shown: 12 genomes with orthologs for Pf1N1B4_1236 only; 11 genomes with orthologs for Pf1N1B4_1869 only