| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N1B4 | 1.0 | Pf1N1B4_5847 | | transcriptional activator FtrA | 1.0 | Pf1N1B4_1694 | | Cystine ABC transporter, permease protein | 0.37 | 5 |
| Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_20385 | | transcriptional regulator | 0.98 | AO353_11670 | | amino acid ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.84 | AO356_01485 | | transcriptional regulator | 0.90 | AO356_10240 | | amino acid ABC transporter permease | low | > 104 |
| Pseudomonas sp. RS175 | 0.84 | PFR28_01278 | | HTH-type transcriptional regulator CdhR | 0.89 | PFR28_04854 | | L-cystine transport system permease protein YecS | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.82 | Pf6N2E2_2172 | | Transcriptional regulator, AraC family | 0.89 | Pf6N2E2_3920 | | Cystine ABC transporter, permease protein | low | > 103 |
| Pseudomonas sp. S08-1 | 0.77 | OH686_02370 | | Transcriptional regulator, AraC family | 0.76 | OH686_18900 | | L-cystine ABC transporter (wide substrate range), permease protein YecS | low | > 80 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_01004 | | HTH-type transcriptional regulator CdhR | 0.47 | MPMX19_05073 | | L-cystine transport system permease protein YecS | low | > 112 |
| Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS21035 | | transcriptional regulator FtrA | 0.46 | HER17_RS20285 | | amino acid ABC transporter permease | low | > 75 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS14485 | | transcriptional regulator FtrA | 0.51 | ABIE40_RS18765 | | amino acid ABC transporter permease | low | > 107 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_1218 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | 0.75 | EX28DRAFT_0629 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 76 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS15355 | | transcriptional regulator FtrA | 0.76 | BWI76_RS18355 | | amino acid ABC transporter permease | low | > 92 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_2740 | | transcriptional regulator, AraC family with amidase-like domain protein | 0.84 | Psyr_0357 | | Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_2740 | | transcriptional regulator, AraC family with amidase-like domain protein | 0.84 | Psyr_0357 | | Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_005199 | | AraC family transcriptional activator FtrA | 0.50 | ABIE53_002869 | | cystine transport system permease protein | low | > 113 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_02247 | | HTH-type transcriptional regulator CdhR | 0.75 | MPMX20_02843 | | L-cystine transport system permease protein YecS | low | > 85 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_03716 | | AraC family transcriptional regulator, transcriptional activator FtrA | 0.51 | H281DRAFT_00383 | | amino acid ABC transporter membrane protein, PAAT family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS29205 | | transcriptional regulator | 0.51 | BPHYT_RS13290 | | cysteine ABC transporter permease | low | > 109 |
| Escherichia coli ECRC101 | 0.48 | MCAODC_16875 | ftrA | transcriptional regulator FtrA | 0.76 | MCAODC_19590 | tcyL | cystine ABC transporter permease | low | > 87 |
| Escherichia coli ECRC98 | 0.48 | JDDGAC_03560 | ftrA | transcriptional regulator FtrA | 0.76 | JDDGAC_00390 | tcyL | cystine ABC transporter permease | low | > 86 |
| Escherichia coli ECRC100 | 0.48 | OKFHMN_01050 | ftrA | transcriptional regulator FtrA | 0.76 | OKFHMN_25800 | tcyL | cystine ABC transporter permease | — | — |
| Escherichia coli ECRC102 | 0.48 | NIAGMN_25195 | ftrA | transcriptional regulator FtrA | 0.76 | NIAGMN_02250 | tcyL | cystine ABC transporter permease | — | — |
| Escherichia coli ECRC99 | 0.48 | KEDOAH_27380 | ftrA | transcriptional regulator FtrA | 0.76 | KEDOAH_02290 | tcyL | cystine ABC transporter permease | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS20670 | | transcriptional regulator FtrA | 0.51 | QEN71_RS05415 | | amino acid ABC transporter permease | low | > 153 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_26900 | ftrA | transcriptional regulator FtrA | 0.76 | HEPCGN_04155 | tcyL | cystine ABC transporter permease | low | > 87 |
| Caulobacter crescentus NA1000 | 0.46 | CCNA_03478 | | AraC-family transcription regulator FtrA | 0.67 | CCNA_01507 | | cystine transport system permease protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.46 | CCNA_03478 | | AraC-family transcription regulator FtrA | 0.67 | CCNA_01507 | | cystine transport system permease protein | low | > 67 |
| Rahnella sp. WP5 | 0.45 | EX31_RS11395 | | transcriptional regulator FtrA | 0.78 | EX31_RS09430 | | cystine ABC transporter permease | low | > 89 |
| Bosea sp. OAE506 | 0.45 | ABIE41_RS09540 | | transcriptional regulator FtrA | 0.36 | ABIE41_RS10680 | | amino acid ABC transporter permease | low | > 77 |
| Variovorax sp. SCN45 | 0.40 | GFF6230 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | 0.35 | GFF1867 | | ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) | low | > 127 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_16615 | | helix-turn-helix domain-containing protein | 0.71 | IAI46_15765 | | cystine ABC transporter permease | low | > 86 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2327 | | transcriptional regulator (RefSeq) | 0.33 | Shewana3_0881 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | low | > 73 |
| Ralstonia sp. UNC404CL21Col | 0.37 | ABZR87_RS18285 | | helix-turn-helix domain-containing protein | 0.37 | ABZR87_RS04710 | | ectoine/hydroxyectoine ABC transporter permease subunit EhuD | low | > 80 |
| Pantoea sp. MT58 | 0.35 | IAI47_21485 | | helix-turn-helix domain-containing protein | 0.82 | IAI47_08180 | | cystine ABC transporter permease | low | > 76 |
| Shewanella loihica PV-4 | 0.34 | Shew_3186 | | AraC family transcriptional regulator (RefSeq) | 0.33 | Shew_3165 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | low | > 60 |
| Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS12255 | | helix-turn-helix domain-containing protein | 0.93 | PFLU_RS01210 | | cystine ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS12255 | | helix-turn-helix domain-containing protein | 0.93 | PFLU_RS01210 | | cystine ABC transporter permease | low | > 109 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS22660 | | helix-turn-helix domain-containing protein | 0.46 | DZA65_RS01305 | | amino acid ABC transporter permease | low | > 75 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS21675 | | helix-turn-helix domain-containing protein | 0.47 | HGI48_RS01260 | | amino acid ABC transporter permease | low | > 71 |
| Dickeya dadantii 3937 | 0.33 | DDA3937_RS21325 | | helix-turn-helix domain-containing protein | 0.46 | DDA3937_RS01280 | | amino acid ABC transporter permease | low | > 74 |
Not shown: 5 genomes with orthologs for Pf1N1B4_5847 only; 33 genomes with orthologs for Pf1N1B4_1694 only