| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N1B4 | 1.0 | Pf1N1B4_826 | | tRNA (5-methoxyuridine) 34 synthase | 1.0 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.28 | 18 |
| Pseudomonas fluorescens GW456-L13 | 0.98 | PfGW456L13_4812 | | tRNA (5-methoxyuridine) 34 synthase | 0.96 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.98 | AO353_16015 | | tRNA (mo5U34)-methyltransferase | 0.95 | AO353_05205 | | peptidase PmbA | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_3158 | | tRNA (5-methoxyuridine) 34 synthase | 0.96 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | low | > 103 |
| Pseudomonas simiae WCS417 | 0.94 | PS417_05220 | | tRNA methyltransferase | 0.95 | PS417_04295 | | peptidase PmbA | 0.24 | 17 |
| Pseudomonas fluorescens FW300-N2C3 | 0.93 | AO356_06450 | | tRNA (mo5U34)-methyltransferase | 0.95 | AO356_07085 | | peptidase PmbA | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.93 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.95 | PFLU_RS04350 | | metalloprotease PmbA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.93 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.95 | PFLU_RS04350 | | metalloprotease PmbA | low | > 109 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00318 | | tRNA U34 carboxymethyltransferase | 0.95 | PFR28_00163 | | Metalloprotease PmbA | low | > 88 |
| Pseudomonas putida KT2440 | 0.87 | PP_1440 | | tRNA (mo5U34)-methyltransferase | 0.91 | PP_0942 | | regulatory protease | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.84 | Psyr_3947 | | Methyltransferase, putative | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.84 | Psyr_3947 | | Methyltransferase, putative | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.80 | Psest_3085 | | methyltransferase, putative | 0.79 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | low | > 67 |
| Pseudomonas sp. S08-1 | 0.76 | OH686_05375 | | tRNA (mo5U34)-methyltransferase | 0.81 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | low | > 80 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS18195 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.48 | BWI76_RS02850 | | metalloprotease PmbA | low | > 92 |
| Escherichia coli ECRC100 | 0.56 | OKFHMN_26220 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | OKFHMN_11925 | pmbA | metalloprotease PmbA | low | > 80 |
| Escherichia coli ECRC101 | 0.56 | MCAODC_19185 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | MCAODC_02430 | pmbA | metalloprotease PmbA | low | > 87 |
| Escherichia coli ECRC99 | 0.56 | KEDOAH_01885 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | KEDOAH_16230 | pmbA | metalloprotease PmbA | — | — |
| Escherichia coli ECRC98 | 0.56 | JDDGAC_00795 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | JDDGAC_15565 | pmbA | metalloprotease PmbA | low | > 86 |
| Escherichia coli ECRC62 | 0.56 | BNILDI_15455 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | BNILDI_07325 | pmbA | metalloprotease PmbA | 0.64 | 4 |
| Escherichia coli ECRC102 | 0.56 | NIAGMN_01840 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | NIAGMN_09775 | pmbA | metalloprotease PmbA | — | — |
| Escherichia coli BL21 | 0.55 | ECD_01842 | | tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent | 0.49 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_01857 | | tRNA U34 carboxymethyltransferase | 0.49 | OHPLBJKB_03800 | | Metalloprotease PmbA | low | > 73 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_04630 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | HEPCGN_10125 | pmbA | metalloprotease PmbA | low | > 87 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_02776 | | tRNA U34 carboxymethyltransferase | 0.49 | MPMX20_00517 | | Metalloprotease PmbA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_0686 | | tRNA (mo5U34)-methyltransferase | 0.49 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | low | > 76 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_16665 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | NOLOHH_04185 | pmbA | metalloprotease PmbA | low | > 75 |
| Escherichia fergusonii Becca | 0.55 | EFB2_02071 | | tRNA U34 carboxymethyltransferase | 0.49 | EFB2_04298 | | Metalloprotease PmbA | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.55 | LU632_RS13460 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.47 | LU632_RS02145 | pmbA | metalloprotease PmbA | low | > 74 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS10700 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.48 | ECOLIN_RS24570 | | metalloprotease PmbA | — | — |
| Escherichia coli BW25113 | 0.55 | b1871 | yecP | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | 0.49 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | low | > 76 |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS10035 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.47 | DDA3937_RS01500 | | metalloprotease PmbA | low | > 74 |
| Pantoea sp. MT58 | 0.55 | IAI47_08405 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.47 | IAI47_02765 | | metalloprotease PmbA | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF1652 | | tRNA (5-methoxyuridine) 34 synthase | 0.48 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | low | > 78 |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS10065 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.47 | HGI48_RS01415 | | metalloprotease PmbA | low | > 71 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS10475 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.47 | DZA65_RS01480 | | metalloprotease PmbA | low | > 75 |
| Shewanella oneidensis MR-1 | 0.54 | SO2436 | | methyltransferase, putative (NCBI ptt file) | 0.50 | SO4078 | pmbA | pmba protein (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_14675 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | IAI46_22575 | | metalloprotease PmbA | low | > 86 |
| Rahnella sp. WP5 | 0.53 | EX31_RS17290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.49 | EX31_RS12320 | | metalloprotease PmbA | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_02226 | | tRNA (mo5U34)-methyltransferase | 0.49 | MIT1002_00230 | | peptidase PmbA | low | > 70 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_1950 | | putative methyltransferase (RefSeq) | 0.51 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_05895 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.48 | CSW01_12845 | | metalloprotease PmbA | low | > 62 |
| Shewanella amazonensis SB2B | 0.52 | Sama_1846 | | methyltransferase, putative (RefSeq) | 0.52 | Sama_0482 | | PmbA protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.52 | Shew_2082 | | putative methyltransferase (RefSeq) | 0.50 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | low | > 60 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS11890 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.50 | HER17_RS20090 | | metalloprotease PmbA | low | > 75 |
| Kangiella aquimarina DSM 16071 | 0.48 | B158DRAFT_1515 | | methyltransferase, putative | 0.41 | B158DRAFT_2075 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | low | > 40 |
Not shown: 1 genomes with orthologs for Pf1N1B4_826 only; 41 genomes with orthologs for Pf1N1B4_1090 only