Conservation of cofitness between PP_0363 and PP_5346 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0363 8-amino-7-oxononanoate synthase 1.0 PP_5346 pyruvate carboxylase subunit B 0.62 7
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit low > 86
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.97 PfGW456L13_729 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.68 59
Pseudomonas sp. RS175 0.84 PFR28_04102 8-amino-7-oxononanoate synthase 0.97 PFR28_04517 Oxaloacetate decarboxylase alpha chain 0.37 21
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_07520 8-amino-7-oxononanoate synthase 0.96 AO353_10025 pyruvate carboxylase subunit B 0.72 7
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.96 Pf6N2E2_4279 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.55 19
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.96 Pf1N1B4_2011 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.52 46
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.55 8
Pseudomonas fluorescens SBW25 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.43 78
Pseudomonas simiae WCS417 0.82 PS417_26000 8-amino-7-oxononanoate synthase 0.95 PS417_28210 pyruvate carboxylase subunit B — —
Pseudomonas stutzeri RCH2 0.82 Psest_0412 8-amino-7-oxononanoate synthase 0.86 Psest_4084 oxaloacetate decarboxylase alpha subunit 0.64 8
Pseudomonas sp. S08-1 0.81 OH686_10350 8-amino-7-oxononanoate synthase 0.88 OH686_13205 oxaloacetate decarboxylase alpha subunit low > 80
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_14140 8-amino-7-oxononanoate synthase 0.96 AO356_12025 pyruvate carboxylase subunit B 0.56 8
Marinobacter adhaerens HP15 0.56 HP15_2485 8-amino-7-oxononanoate synthase 0.65 HP15_3935 pyruvate carboxylase subunit B low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.46 GFF225 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) low > 78
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_05650 8-amino-7-oxononanoate synthase 0.47 CSW01_04100 oxaloacetate decarboxylase subunit alpha low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_01380 8-amino-7-oxononanoate synthase 0.46 MIT1002_01135 Methylmalonyl-CoA carboxyltransferase 5S subunit low > 70
Klebsiella michiganensis M5al 0.35 BWI76_RS08765 8-amino-7-oxononanoate synthase 0.46 BWI76_RS04420 oxaloacetate decarboxylase low > 92
Shewanella loihica PV-4 0.35 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) 0.47 Shew_1220 pyruvate carboxylase subunit B (RefSeq) — —
Shewanella sp. ANA-3 0.34 Shewana3_2518 aminotransferase, class I and II (RefSeq) 0.45 Shewana3_3165 oxaloacetate decarboxylase (RefSeq) — —
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS01195 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.14 HMPREF1058_RS14410 oxaloacetate decarboxylase — —
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS16535 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.14 ABI39_RS10030 oxaloacetate decarboxylase — —
Shewanella amazonensis SB2B 0.32 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.48 Sama_1052 oxaloacetate decarboxylase (RefSeq) low > 62
Methanococcus maripaludis S2 0.31 MMP_RS08100 8-amino-7-oxononanoate synthase 0.45 MMP_RS01820 sodium-extruding oxaloacetate decarboxylase subunit alpha — —
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS14215 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.14 HMPREF1181_RS05570 pyruvate carboxylase subunit B — —
Methanococcus maripaludis JJ 0.30 MMJJ_RS06265 8-amino-7-oxononanoate synthase 0.45 MMJJ_RS03560 sodium-extruding oxaloacetate decarboxylase subunit alpha — —
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02588 putative 8-amino-7-oxononanoate synthase 0.14 BACOVA_04453 Biotin-requiring enzyme — —
Bacteroides thetaiotaomicron VPI-5482 0.29 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.14 BT1697 pyruvate carboxylase subunit B (NCBI ptt file) low > 81

Not shown: 73 genomes with orthologs for PP_0363 only; 0 genomes with orthologs for PP_5346 only