Conservation of cofitness between PP_2160 and PP_5338 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 1.0 PP_5338 aspartate ammonia-lyase 0.43 1
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.92 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.93 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_1907 GTP cyclohydrolase I 0.92 Psyr_5051 Aspartate ammonia-lyase — —
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_1907 GTP cyclohydrolase I 0.92 Psyr_5051 Aspartate ammonia-lyase low > 86
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.93 AO353_09950 aspartate ammonia-lyase low > 101
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.93 PFLU_RS29815 aspartate ammonia-lyase 0.42 36
Pseudomonas fluorescens SBW25 0.81 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.93 PFLU_RS29815 aspartate ammonia-lyase low > 109
Pseudomonas simiae WCS417 0.81 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.93 PS417_28130 aspartate ammonia-lyase — —
Pseudomonas sp. RS175 0.81 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.93 PFR28_04498 Aspartate ammonia-lyase low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.94 Pf6N2E2_4085 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.94 AO356_11090 aspartate ammonia-lyase low > 104
Pseudomonas stutzeri RCH2 0.78 Psest_2714 7-cyano-7-deazaguanine reductase 0.84 Psest_4074 Aspartate ammonia-lyase — —
Pseudomonas sp. S08-1 0.75 OH686_22700 queuine synthase 0.88 OH686_13315 Aspartate ammonia-lyase — —
Dechlorosoma suillum PS 0.53 Dsui_0505 7-cyano-7-deazaguanine reductase 0.56 Dsui_3481 aspartate ammonia-lyase low > 51
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.53 CSW01_13620 aspartate ammonia-lyase low > 62
Serratia liquefaciens MT49 0.50 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 IAI46_01480 aspartate ammonia-lyase low > 86
Rahnella sp. WP5 0.49 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.53 EX31_RS08965 aspartate ammonia-lyase low > 89
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.59 RR42_RS26135 aspartate ammonia-lyase low > 128
Escherichia coli ECRC102 0.49 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 NIAGMN_10275 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC101 0.49 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 OKFHMN_12430 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC101 0.49 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 MCAODC_02940 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC98 0.49 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 JDDGAC_16065 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC99 0.49 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 KEDOAH_15735 aspA aspartate ammonia-lyase — —
Escherichia fergusonii Becca 0.49 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.52 EFB2_04396 Aspartate ammonia-lyase low > 86
Escherichia coli ECOR38 0.49 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 HEPCGN_10655 aspA aspartate ammonia-lyase low > 85
Escherichia coli Nissle 1917 0.49 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 ECOLIN_RS24045 aspartate ammonia-lyase low > 52
Escherichia coli ECOR27 0.49 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 NOLOHH_04695 aspA aspartate ammonia-lyase low > 57
Escherichia coli ECRC62 0.49 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 BNILDI_06795 aspA aspartate ammonia-lyase — —
Escherichia coli BL21 0.49 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) 0.52 ECD_04009 aspartate ammonia-lyase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.52 OHPLBJKB_03904 Aspartate ammonia-lyase low > 73
Escherichia coli BW25113 0.48 b2794 yqcD hypothetical protein (NCBI) 0.52 b4139 aspA aspartate ammonia-lyase (aspartase) (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF4849 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.52 GFF2013 Aspartate ammonia-lyase (EC 4.3.1.1) low > 78
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase 0.52 EX28DRAFT_3336 aspartate ammonia-lyase low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.52 MPMX20_00419 Aspartate ammonia-lyase low > 85
Pantoea sp. MT58 0.48 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.51 IAI47_17320 aspartate ammonia-lyase low > 76
Klebsiella michiganensis M5al 0.47 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.52 BWI76_RS02330 aspartate ammonia-lyase low > 92
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.56 QEN71_RS33820 aspartate ammonia-lyase low > 153
Shewanella amazonensis SB2B 0.47 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.58 Sama_0789 aspartate ammonia-lyase (RefSeq) low > 62
Dickeya dadantii 3937 0.47 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.51 DDA3937_RS02720 aspartate ammonia-lyase low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.51 HGI48_RS02695 aspartate ammonia-lyase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.51 DZA65_RS02850 aspartate ammonia-lyase low > 75
Pectobacterium carotovorum WPP14 0.46 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 HER17_RS18835 aspartate ammonia-lyase low > 75
Variovorax sp. SCN45 0.45 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) 0.52 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.52 ABID97_RS05930 aspartate ammonia-lyase low > 91
Castellaniella sp019104865 MT123 0.42 ABCV34_RS06920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 ABCV34_RS07730 aspartate ammonia-lyase low > 48
Acinetobacter radioresistens SK82 0.38 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.51 MPMX26_01469 Aspartate ammonia-lyase low > 36

Not shown: 24 genomes with orthologs for PP_2160 only; 11 genomes with orthologs for PP_5338 only