Conservation of cofitness between PP_3600 and PP_5322 in Pseudomonas putida KT2440

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3600 glucarate transporter 1.0 PP_5322 putative metal ion transporter 0.28 11
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_5043 D-galactarate permease 0.85 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_07175 glucarate transporter 0.86 AO356_11010 hypothetical protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS04245 MFS transporter 0.86 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25 0.82 PFLU_RS04245 MFS transporter 0.86 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3297 D-galactarate permease 0.86 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains low > 103
Pseudomonas sp. RS175 0.82 PFR28_00144 putative glucarate transporter 0.86 PFR28_04481 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.82 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.86 PS417_28050 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_05295 glucarate transporter 0.86 AO353_09865 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1108 D-galactarate permease 0.85 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4226 D-galactonate transporter 0.86 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4226 D-galactonate transporter 0.86 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.1209.1 D-galactarate permease 0.43 Xcc-8004.3404.1 FIG01211089: hypothetical protein low > 74
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS15805 glucarate transporter 0.44 HSERO_RS05435 hemolysin protein low > 78
Klebsiella michiganensis M5al 0.68 BWI76_RS22835 MFS transporter 0.13 BWI76_RS02765 membrane protein low > 92
Escherichia coli BL21 0.68 ECD_02634 putative D-glucarate transporter 0.13 ECD_04089 UPF0053 family inner membrane protein low > 61
Escherichia coli ECRC62 0.68 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.12 BNILDI_07240 tlyC Polyamine export protein low > 75
Escherichia coli Nissle 1917 0.68 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.13 ECOLIN_RS24495 hemolysin family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00942 putative glucarate transporter 0.13 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia coli ECOR27 0.68 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.13 NOLOHH_04280 paeA Polyamine export protein low > 75
Escherichia coli ECOR38 0.68 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.13 HEPCGN_10215 paeA Polyamine export protein low > 87
Escherichia fergusonii Becca 0.68 EFB2_01128 putative glucarate transporter 0.12 EFB2_04311 hypothetical protein low > 86
Escherichia coli BW25113 0.68 b2789 gudP predicted D-glucarate transporter (NCBI) 0.13 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4843 D-glucarate permease 0.13 GFF871 Putative membrane protein low > 78
Escherichia coli ECRC100 0.68 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.13 OKFHMN_12015 paeA Polyamine export protein low > 80
Escherichia coli ECRC101 0.68 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.13 MCAODC_02530 paeA Polyamine export protein low > 87
Escherichia coli ECRC102 0.68 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.13 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli ECRC99 0.68 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.13 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli ECRC98 0.68 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.13 JDDGAC_15655 paeA Polyamine export protein low > 86
Pectobacterium carotovorum WPP14 0.67 HER17_RS04075 MFS transporter 0.13 HER17_RS03970 hemolysin family protein low > 75
Rahnella sp. WP5 0.67 EX31_RS03160 MFS transporter 0.12 EX31_RS08705 HlyC/CorC family transporter low > 89
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS31870 MFS transporter 0.43 QEN71_RS17705 hemolysin family protein low > 153
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2870 D-galactonate transporter 0.13 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS06310 MFS transporter 0.11 LU632_RS02100 hemolysin family protein low > 74
Enterobacter sp. TBS_079 0.66 MPMX20_03659 putative glucarate transporter 0.12 MPMX20_00495 hypothetical protein low > 85
Pantoea sp. MT58 0.65 IAI47_04080 MFS transporter 0.13 IAI47_02710 HlyC/CorC family transporter low > 76
Dickeya dadantii 3937 0.65 DDA3937_RS17055 MFS transporter 0.13 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Dickeya dianthicola ME23 0.64 DZA65_RS18185 MFS transporter 0.13 DZA65_RS18310 HlyC/CorC family transporter low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS17110 MFS transporter 0.13 HGI48_RS17225 HlyC/CorC family transporter low > 71
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS29085 glucarate transporter 0.13 RR42_RS04375 magnesium transporter low > 128
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS24150 glucarate transporter 0.45 BPHYT_RS33815 hypothetical protein low > 109
Paraburkholderia graminis OAS925 0.64 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.44 ABIE53_004821 CBS domain containing-hemolysin-like protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.46 H281DRAFT_06055 Hemolysin, contains CBS domains low > 103
Variovorax sp. SCN45 0.51 GFF7272 D-glucarate permease 0.13 GFF2520 UPF0053 inner membrane protein YtfL low > 127

Not shown: 7 genomes with orthologs for PP_3600 only; 19 genomes with orthologs for PP_5322 only